PROJECT NAME
GOLD Project ID
Gp0020486  
Project Name
Actinomyces massiliensis 4401292  
Other Names
  
Legacy ER Project ID
9781  
Legacy GOLD ID
Gi16870  
NCBI BioProject Name Actinomyces massiliensis 4401292 strain:4401292T
NCBI BioProject ID 127369
NCBI BioProject Accession
PRJNA127369  
NCBI Locus Tag
W5W  
NCBI BioSample Accession
SAMN02469892  
PI
Added By JGI automated process on 2012-04-04
Last Modified By Auto script update processes on 2014-08-18
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Permanent Draft  
Project Relevance Medical
Sequencing Center Aix-Marseille University (France)
Collaborating Institute
  
Funding Agency
  
Project Description
Actinomyces massiliensis 4401292 Genome sequencing  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications Journal of bacteriology 194(18):5121 Draft genome sequence of Actinomyces massiliensis strain 4401292T.
Other Publications
  
Isolation Publications
  
PROJECT COMPOSITION
Studies Actinomyces massiliensis 4401292
Analysis Projects Actinomyces massiliensis 4401292
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
68  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0003870
Organism Name
Actinomyces massiliensis 4401292  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
ACTINOBACTERIA  
Genus
Actinomyces  
Genus Synonyms
  
Species
Actinomyces massiliensis  
Subspecies
  
Species Synonyms
  
Strain
4401292  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
CCUG 53522  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.14126  
Exemplar Name
Actinomyces massiliensis  
Taxon DOI
10.1601/tx.14126  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1167628
NCBI Kingdom
  
NCBI Phylum
Actinobacteria  
NCBI Class
Actinobacteria  
NCBI Order
Actinomycetales  
NCBI Family
Actinomycetaceae  
NCBI Genus
Actinomyces  
NCBI Species
Actinomyces massiliensis  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Human  
Ecosystem Type
Circulatory system  
Ecosystem Subtype
Blood  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 837658
Genbank 16S ID EF558367
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Facultative  
Cell Shape
Rod-shaped  
Motility
Nonmotile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
37 C  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Blood
Host
Human
Human blood
Human oral cavity
Metabolisms
  
Phenotypes
  
Energy Sources
  
CYANOBACTERIA METADATA
Filaments
  
Filament Type
  
Differentiated Cells
  
Position Of Heterocysts
  
Cysts
  
Mode Of Reproduction
  
Trichome
  
Trichome Type
  
Carotenoids
  
Pigments
  
Phage Infectivity
  
Phage Type
  
Restriction Enzyme
  
Toxin Production
  
Toxin Type
  
Secondary Metabolites
  
Developmental Cycle
  
Branching
  
Gas Vesicles
  
Gas Vesicle Type
  
Diagnostic Inclusion Body Information
  
Extracellular Structures
  
Bloom Forming
  
Pigment Type
  
Complementary chromatic adaptation (CCA)
  
Medium Types
  

 

 

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