PROJECT NAME
GOLD Project ID
Gp0020483  
Project Name
Francisella noatunensis orientalis Toba 04  
Other Names
  
Legacy ER Project ID
9778  
Legacy GOLD ID
Gi16867, Gc02306  
NCBI BioProject Name Francisella noatunensis subsp. orientalis str. Toba 04
NCBI BioProject ID 82619
NCBI BioProject Accession
PRJNA82619  
NCBI Locus Tag
OOM  
NCBI BioSample Accession
  
PI
Added By JGI automated process on 2012-04-04
Last Modified By Auto script update processes on 2014-03-26
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Fish Pathogen
Sequencing Center University of Bergen (Sweden)
Collaborating Institute
  
Funding Agency
  
Project Description
This bacterial species is infecting tilapia fishes and leads them to death. Understanding the biological characteristics of this genome will help us to provide the fishes from this bacterium.  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
Isolation Publications
  
PROJECT COMPOSITION
Studies Francisella noatunensis subsp. orientalis str. Toba 04
Analysis Projects Francisella noatunensis orientalis Toba 04
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
32  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0020483
Organism Name
Francisella noatunensis orientalis Toba 04  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-GAMMA  
Genus
Francisella  
Genus Synonyms
  
Species
Francisella noatunensis  
Subspecies
orientalis  
Species Synonyms
  
Strain
Toba 04  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
No  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1163389
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Gammaproteobacteria  
NCBI Order
Thiotrichales  
NCBI Family
Francisellaceae  
NCBI Genus
Francisella  
NCBI Species
Francisella noatunensis  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Fish  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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