PROJECT INFORMATION
GOLD Project ID
Gp0019443  
Project Name
Rahnella aquatilis HX2  
Other Names
  
Legacy ER Project ID
24862  
Legacy GOLD ID
Gc02178  
NCBI BioProject Name Rahnella aquatilis HX2
NCBI BioProject ID 85539
NCBI BioProject Accession PRJNA85539
NCBI Locus Tag
Q7S  
NCBI BioSample Accession SAMN02603118
PI Yanbin Guo
Added By Nikos Kyrpides on 2012-03-30
Last Modified By Alejandro Rodriguez Mojica on 2018-07-11
Project Comments
  
Project Status
Complete and Published  
Project Relevance Antibiotic production
Agricultural
Biotechnological
Sequencing Center China Agricultural University (China)
Collaborating Institute
  
Funding Agency
  
Project Description
Gram-negative. Rahnella aquatilis produce antibiotic and could significantly suppress crown gall formation on sunflowers and grapes. It also produce IAA and gluconate which can promote plant growth. Isolated from soil of grape vineyard in Beijing  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications Journal of bacteriology 194(23):6646-7 Draft genome sequence of Rahnella aquatilis strain HX2, a plant growth-promoting rhizobacterium isolated from vineyard soil in Beijing, China.
Other Publications
  
PROJECT COMPOSITION
Study Rahnella aquatilis HX2
Analysis Projects Rahnella aquatilis HX2
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
52  
Chromosome Count
1  
Plasmid Count
3  
ORGANISM NAME
GOLD Organism ID Go0019443
Organism Name
Rahnella aquatilis HX2  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-GAMMA  
Genus
Rahnella  
Genus Synonyms
  
Species
Rahnella aquatilis  
Subspecies
  
Species Synonyms
  
Strain
HX2  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
No  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1151116
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Gammaproteobacteria  
NCBI Order
Enterobacterales  
NCBI Family
Yersiniaceae  
NCBI Genus
Rahnella  
NCBI Species
Rahnella aquatilis  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Terrestrial  
Ecosystem Type
Soil  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Agricultural land  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases None
Known Habitats Soil
Metabolisms
  
Phenotypes
  
Energy Sources Heterotroph

 

 

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