PROJECT INFORMATION
GOLD Project ID
Gp0018204  
Project Name
Chlorobaculum limnaeum RK-j-1  
Other Names
  
Legacy ER Project ID
8122  
Legacy GOLD ID
  
NCBI BioProject Name
  
NCBI BioProject Accession
NCBI Locus Tag
  
NCBI BioSample Accession
Source Sample ID
PI Unknown
Added By Yusuke Tsukatani on 2012-02-21
Last Modified By Nikos Kyrpides on 2012-02-22
Project Comments
  
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center
  
Collaborating Institute
  
Funding Agency
  
Project Description
  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
JGI Data Utilization Status
  
JGI Award DOI
Genome Publications
  
Other Publications
  
Ignored Publications
  
Unassigned Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study C. limnaeum RK-j-1
Organism Chlorobaculum limnaeum RK-j-1
Analysis Projects Chlorobaculum limnaeum RK-j-1
Number of Analysis Projects (AP) 1
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 1: Standard Draft
Finishing Goal
Contamination Screening Input
  
DNA Amplification Method
  
Single Cell Lysis Protocol
  
Single Cell Lysis Approach
  
Sequencing Comments
  
DNA Amplification Kit
  
Sequencing Technology (MIGS-29) 454 GS FLX Titanium
Library Method (MIGS-28)
  
Library Layout
  
Library Screening Method
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0018204
Organism Name
Chlorobaculum limnaeum RK-j-1  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
CHLOROBIOTA  
Genus
Chlorobaculum  
Genus Synonyms
  
Species
Chlorobaculum limnaeum  
Subspecies
  
Species Synonyms
  
Strain
RK-j-1  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 274537
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Chlorobiota  
NCBI Class
Chlorobiia  
NCBI Order
Chlorobiales  
NCBI Family
Chlorobiaceae  
NCBI Genus
Chlorobaculum  
NCBI Species
Chlorobaculum limnaeum  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Freshwater  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
Anaerobe  
Cell Shape
Rod-shaped  
Motility
Nonmotile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
Brown  
Gram Staining
Gram-  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Fresh water
Metabolisms
  
Phenotypes Photosynthetic
Energy Sources Photosynthetic

 

 

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