PROJECT INFORMATION
GOLD Project ID
Gp0017782  
Project Name
Phlebiopsis gigantea 11061_1 CR5-6  
Other Names
  
Legacy ER Project ID
23034  
Legacy GOLD ID
Gi13896  
NCBI BioProject Name Phlebiopsis gigantea 11061_1 CR5-6
NCBI BioProject ID 207860
NCBI BioProject Accession PRJNA207860
NCBI Locus Tag
M424  
NCBI BioSample Accession SAMN02746081
PI Daniel Cullen
Added By JGI automated process on 2012-02-08
Last Modified By Tatiparthi Reddy on 2017-08-31
Project Comments
  
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute Forest Products Laboratory, U.S. Forest Service, U.S. Department of Agriculture
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
  
Is JGI Project
Yes  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information
  
Database
  
Genome Publications PLoS genetics 10(12):e1004759 Analysis of the Phlebiopsis gigantea genome, transcriptome and secretome provides insight into its pioneer colonization strategies of wood.

Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Phlebiopsis gigantea
Organism Phlebiopsis gigantea 11061_1 CR5-6
Analysis Projects Phlebiopsis gigantea 11061_1 CR5-6
Phlebiopsis gigantea 11061_1 CR5-6
Number of Analysis Projects (AP)
2  
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 2: High-Quality Draft
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0017782
Organism Name
Phlebiopsis gigantea 11061_1 CR5-6  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
EUKARYAL  
Phylogeny
FUNGI-BASIDIOMYCOTA  
Genus
Phlebiopsis  
Genus Synonyms
  
Species
Phlebiopsis gigantea  
Subspecies
  
Species Synonyms
  
Strain
11061_1 CR5-6  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 82310
NCBI Superkingdom
Eukaryota  
NCBI Kingdom
Fungi  
NCBI Phylum
Basidiomycota  
NCBI Class
Agaricomycetes  
NCBI Order
Polyporales  
NCBI Family
Phanerochaetaceae  
NCBI Genus
Phlebiopsis  
NCBI Species
Phlebiopsis gigantea  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases None
Known Habitats
  
Metabolisms Lignin degrader
Phenotypes
  
Energy Sources
  

 

 

  You are going to add the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  You are going to remove permissions for the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  Changing the SP visibility will also change visibility on the following items:

 

Do you want to continue with this visibility change?

 

 

  Checking that this Sequencing Project can be made private:

 

Do you want to continue with this visibility change?

 

 

 

 

 

  Changing the SP Sequencing Strategy will also effect these items:

 

Do you want to continue with this Sequencing Strategy change?