PROJECT NAME
GOLD Project ID
Gp0017607  
Project Name
Thermoanaerobacterium saccharolyticum JW/SL-YS485, DSM 8691  
Other Names
  
Legacy ER Project ID
7899  
Legacy GOLD ID
Gi13615, Gc02308  
NCBI BioProject Name Thermoanaerobacterium saccharolyticum JW/SL-YS485
NCBI BioProject ID 73961
NCBI BioProject Accession
PRJNA73961  
NCBI Locus Tag
TSAC  
NCBI BioSample Accession
  
PI
Added By JGI automated process on 2012-02-02
Last Modified By Auto script update processes on 2014-03-26
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Bioenergy
Biotechnological
Ethanol production
Sequencing Center Oak Ridge National Laboratory (USA)
Collaborating Institute
  
Funding Agency
  
Project Description
Thermoanaerobacterium saccharolyticum JW/SL-YS485 is an anaerobic thermophile that grows at pH values ranging from 3.85 to 6.35 and at temperatures ranging from 30 to 66?C. It can ferment xylan and biomass-derived sugars, to produce ethanol.  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Thermoanaerobacterium saccharolyticum JW/SL-YS485
Analysis Projects Thermoanaerobacterium saccharolyticum JW/SL-YS485, DSM 8691
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
35  
Chromosome Count
1  
Plasmid Count
1  
ORGANISM NAME
GOLD Organism ID Go0017607
Organism Name
Thermoanaerobacterium saccharolyticum JW/SL-YS485, DSM 8691  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Thermoanaerobacterium  
Genus Synonyms
  
Species
Thermoanaerobacterium saccharolyticum  
Subspecies
  
Species Synonyms
  
Strain
JW/SL-YS485  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
DSM 8691  
Type Strain
No  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1094508
NCBI Kingdom
  
NCBI Phylum
Firmicutes  
NCBI Class
Clostridia  
NCBI Order
Thermoanaerobacterales  
NCBI Family
Thermoanaerobacterales Family III. Incertae Sedis  
NCBI Genus
Thermoanaerobacterium  
NCBI Species
Thermoanaerobacterium saccharolyticum  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Thermal springs  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Anaerobe  
Cell Shape
Rod-shaped  
Motility
  
Sporulation
  
Temperature Range
Thermophile  
Temperature Optimum
30- 66oC  
Salinity
  
pH
3.85 - 6.35  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Aquatic
Hot spring
Sediment
Metabolisms Xylan degrader
Phenotypes
  
Energy Sources
  
CYANOBACTERIA METADATA
Filaments
  
Filament Type
  
Differentiated Cells
  
Position Of Heterocysts
  
Cysts
  
Mode Of Reproduction
  
Trichome
  
Trichome Type
  
Carotenoids
  
Pigments
  
Phage Infectivity
  
Phage Type
  
Restriction Enzyme
  
Toxin Production
  
Toxin Type
  
Secondary Metabolites
  
Developmental Cycle
  
Branching
  
Gas Vesicles
  
Gas Vesicle Type
  
Diagnostic Inclusion Body Information
  
Extracellular Structures
  
Bloom Forming
  
Pigment Type
  
Complementary chromatic adaptation (CCA)
  
Medium Types
  

 

 

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