PROJECT INFORMATION
GOLD Project ID
Gp0016777  
Project Name
Streptomyces hygroscopicus jinggangensis 5008  
Other Names
  
Legacy ER Project ID
7661  
Legacy GOLD ID
Gi13377, Gc02101  
NCBI BioProject Name Streptomyces hygroscopicus subsp. jinggangensis 5008
NCBI BioProject ID 81087
NCBI BioProject Accession PRJNA81087
NCBI Locus Tag
SHJG  
NCBI BioSample Accession
PI Linquan Bai
Added By JGI automated process on 2012-02-02
Last Modified By JGI automated process on 2014-03-26
Project Comments
  
Project Status
Complete and Published  
Project Relevance Antibiotic production
Biotechnological
Sequencing Center Shanghai Jiao Tong University (China)
Collaborating Institute
  
Funding Agency
  
Project Description
Genomic analysis of validamycin-producing Streptomyces hygroscopicus var. jinggangensis 5008  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications BMC genomics Genomic and transcriptomic insights into the thermo-regulated biosynthesis of validamycin in Streptomyces hygroscopicus 5008.
Other Publications
  
PROJECT COMPOSITION
Study Streptomyces hygroscopicus jinggangensis 5008
Analysis Projects Streptomyces hygroscopicus jinggangensis 5008
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
72  
Chromosome Count
1  
Plasmid Count
2  
ORGANISM NAME
GOLD Organism ID Go0016777
Organism Name
Streptomyces hygroscopicus jinggangensis 5008  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
ACTINOBACTERIA  
Genus
Streptomyces  
Genus Synonyms
  
Species
Streptomyces hygroscopicus  
Subspecies
jinggangensis  
Species Synonyms
  
Strain
5008  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1133850
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Actinobacteria  
NCBI Class
Actinobacteria  
NCBI Order
Streptomycetales  
NCBI Family
Streptomycetaceae  
NCBI Genus
Streptomyces  
NCBI Species
Streptomyces hygroscopicus  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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