PROJECT NAME
GOLD Project ID
Gp0016619  
Project Name
Lactobacillus salivarius SMXD51  
Other Names
  
Legacy ER Project ID
7631  
Legacy GOLD ID
Gi13347  
NCBI BioProject Name Lactobacillus salivarius SMXD51
NCBI BioProject ID 75261
NCBI BioProject Accession
PRJNA75261  
NCBI Locus Tag
SMXD51  
NCBI BioSample Accession
SAMN02470767  
PI
Added By JGI automated process on 2012-02-02
Last Modified By Auto script update processes on 2014-03-26
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Permanent Draft  
Project Relevance Environmental
Sequencing Center Oniris
Collaborating Institute
  
Funding Agency
  
Project Description
Lactobacillus salivarius SMXD51 Genome sequencing  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications Journal of bacteriology 194(11):3008-9 Genome sequence of Lactobacillus salivarius SMXD51, a potential probiotic strain isolated from chicken cecum, showing anti-campylobacter activity.
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Lactobacillus salivarius SMXD51
Analysis Projects Lactobacillus salivarius SMXD51
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454-GS-FLX-Titanium
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
33  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0016619
Organism Name
Lactobacillus salivarius SMXD51  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Lactobacillus  
Genus Synonyms
  
Species
Lactobacillus salivarius  
Subspecies
  
Species Synonyms
  
Strain
SMXD51  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
No  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1108963
NCBI Kingdom
  
NCBI Phylum
Firmicutes  
NCBI Class
Bacilli  
NCBI Order
Lactobacillales  
NCBI Family
Lactobacillaceae  
NCBI Genus
Lactobacillus  
NCBI Species
Lactobacillus salivarius  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Birds  
Ecosystem Type
Digestive system  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Facultative  
Cell Shape
Rod-shaped  
Motility
  
Sporulation
Nonsporulating  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases None
Known Habitats Intestinal tract
Oral cavity
Vagina
Metabolisms Homofermentative
Phenotypes
  
Energy Sources
  

 

 

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