PROJECT INFORMATION
GOLD Project ID
Gp0016235  
Project Name
Helicobacter pylori XZ274  
Other Names
  
Legacy ER Project ID
7095  
Legacy GOLD ID
Gi12811, Gc02232  
NCBI BioProject Name Helicobacter pylori XZ274
NCBI BioProject ID 79003
NCBI BioProject Accession PRJNA79003
NCBI Locus Tag
MWE  
NCBI BioSample Accession SAMN02603962
PI Ying Guo
Added By JGI automated process on 2012-02-02
Last Modified By Alejandro Rodriguez Mojica on 2018-07-11
Project Comments
  
Project Status
Complete and Published  
Project Relevance Medical
Sequencing Center Third Military Medical University (China)
Collaborating Institute
  
Funding Agency
  
Project Description
The Genome Sequence of Helicobater Pylori XZ274. HP XZ274 was isolated from a female Tibetan gastric cancer patient's stomach in China.  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications Journal of bacteriology 194(15):4146-7 Genome of Helicobacter pylori strain XZ274, an isolate from a tibetan patient with gastric cancer in China.
Other Publications
  
PROJECT COMPOSITION
Study Helicobacter pylori XZ274
Analysis Projects Helicobacter pylori XZ274
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
39  
Chromosome Count
1  
Plasmid Count
1  
ORGANISM NAME
GOLD Organism ID Go0016235
Organism Name
Helicobacter pylori XZ274  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-EPSILON  
Genus
Helicobacter  
Genus Synonyms
  
Species
Helicobacter pylori  
Subspecies
  
Species Synonyms
  
Strain
XZ274  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1127122
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Epsilonproteobacteria  
NCBI Order
Campylobacterales  
NCBI Family
Helicobacteraceae  
NCBI Genus
Helicobacter  
NCBI Species
Helicobacter pylori  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Human  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Host
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

  You are going to add the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  You are going to remove permissions for the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  Changing the SP visibility will also change visibility on the following items:

 

Do you want to continue with this visibility change?

 

 

  Checking that this Sequencing Project can be made private:

 

Do you want to continue with this visibility change?