PROJECT INFORMATION
GOLD Project ID
Gp0016114  
Project Name
Methylotenera sp. 1P/1  
Other Names
  
Legacy ER Project ID
21920  
Legacy GOLD ID
Gi14136  
NCBI BioProject Name Methylotenera sp. 1P/1
NCBI BioProject ID 165587
NCBI BioProject Accession PRJNA165587
NCBI Locus Tag
A3Q3  
NCBI BioSample Accession SAMN02256394
PI Ludmila Chistoserdova
Added By JGI automated process on 2012-01-27
Last Modified By JGI automated process on 2014-08-18
Project Comments
  
Project Status
Permanent Draft  
Project Relevance Comparative analysis
Biotechnological
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute University of Washington (USA)
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Genomes of fifty methylotrophs isolated from Lake Washington  
Is JGI Project
Yes  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Genomes of fifty methylotrophs isolated from Lake Washington
Organism Methylotenera sp. 1P/1
Analysis Projects Methylotenera sp. 1P/1
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 2: High-Quality Draft
Finishing Goal Level 3: Improved-High-Quality Draft
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina HiSeq 2000
Library Method (MIGS-28)
Illumina CLIP PE, Illumina Std PE  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
46  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0016114
Organism Name
Methylotenera sp. 1P/1  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-BETA  
Genus
Methylotenera  
Genus Synonyms
  
Species
Methylotenera sp. 1P/1  
Subspecies
  
Species Synonyms
  
Strain
1P/1  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1131551
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Betaproteobacteria  
NCBI Order
Nitrosomonadales  
NCBI Family
Methylophilaceae  
NCBI Genus
Methylotenera  
NCBI Species
Methylotenera sp. 1P/1  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Freshwater  
Ecosystem Subtype
Lentic  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Aquatic
Fresh water
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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