PROJECT NAME
GOLD Project ID
Gp0015336  
Project Name
Pyrobaculum aerophilum IM2 DSM 7523 population L  
Other Names
  
Legacy ER Project ID
22063  
Legacy GOLD ID
Gr00469  
NCBI BioProject Name Pyrobaculum aerophilum IM2 DSM 7523 population L
NCBI BioProject ID 337215
NCBI BioProject Accession
PRJNA337215  
NCBI Locus Tag
BE148  
NCBI BioSample Accession
SAMN05519089  
PI Todd Lowe
Added By JGI automated process on 2012-01-27
Last Modified By Auto script update processes on 2014-05-20
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Resequencing  
PROJECT INFORMATION
Project Status
incomplete  
Project Relevance
  
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute University of California, Santa Cruz (USA)
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
PROJECT COMPOSITION
Studies Experimental genome evolution in the physiologically versatile, hyperthermophilic crenarchaeal genus Pyrobaculum
Analysis Projects
  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0015336
Organism Name
Pyrobaculum aerophilum IM2 DSM 7523 population L  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
ARCHAEAL  
Phylogeny
CRENARCHAEOTA-THERMOPROTEI  
Genus
Pyrobaculum  
Genus Synonyms
  
Species
Pyrobaculum aerophilum  
Subspecies
  
Species Synonyms
  
Strain
IM2  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
DSM 7523  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.14  
Exemplar Name
Pyrobaculum aerophilum  
Taxon DOI
10.1601/tx.14  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 178306
NCBI Kingdom
  
NCBI Phylum
Crenarchaeota  
NCBI Class
Thermoprotei  
NCBI Order
Thermoproteales  
NCBI Family
Thermoproteaceae  
NCBI Genus
Pyrobaculum  
NCBI Species
Pyrobaculum aerophilum  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Marine  
Ecosystem Subtype
Hydrothermal vents  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 267735
Genbank 16S ID L07510
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Facultative  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
Nonsporulating  
Temperature Range
Hyperthermophile  
Temperature Optimum
74 - 104  
Salinity
  
pH
7  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Aquatic
Hydrothermal vent
Marine
Marine geothermal field
Metabolisms
  
Phenotypes
  
Energy Sources
  
CYANOBACTERIA METADATA
Filaments
  
Filament Type
  
Differentiated Cells
  
Position Of Heterocysts
  
Cysts
  
Mode Of Reproduction
  
Trichome
  
Trichome Type
  
Carotenoids
  
Pigments
  
Phage Infectivity
  
Phage Type
  
Restriction Enzyme
  
Toxin Production
  
Toxin Type
  
Secondary Metabolites
  
Developmental Cycle
  
Branching
  
Gas Vesicles
  
Gas Vesicle Type
  
Diagnostic Inclusion Body Information
  
Extracellular Structures
  
Bloom Forming
  
Pigment Type
  
Complementary chromatic adaptation (CCA)
  
Medium Types
  

 

 

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