PROJECT INFORMATION
GOLD Project ID
Gp0014275  
Project Name
Alicyclobacillus acidocaldarius HSU9  
Other Names
  
Legacy ER Project ID
6362  
Legacy GOLD ID
Gi12077  
NCBI BioProject Name Alicyclobacillus acidocaldarius subsp. acidocaldarius HSU9
NCBI BioProject ID 168064
NCBI BioProject Accession PRJNA168064
NCBI Locus Tag
A472  
NCBI BioSample Accession
PI Mark Wilson
Added By Ionna Pagani on 2012-01-18
Last Modified By Tatiparthi Reddy on 2012-07-12
Project Comments
  
Project Status
incomplete  
Project Relevance
  
Sequencing Center Axeq Technologies (South Korea)
Collaborating Institute Humboldt State University (USA)
Funding Agency National Science Foundation (NSF) (USA)
Project Description
This isolate is one of a number of organisms from a hot acid lake where high levels of horizontal gene transfer may be occurring.  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Alicyclobacillus acidocaldarius HSU9
Organism Alicyclobacillus acidocaldarius HSU9
Analysis Projects
  
Number of Analysis Projects (AP)
0  
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina
Library Method (MIGS-28)
mate-pair inserts of 2.7 k and 0.2 kbp  
Number Of Reads
60,472,446  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0014275
Organism Name
Alicyclobacillus acidocaldarius HSU9  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Alicyclobacillus  
Genus Synonyms
  
Species
Alicyclobacillus acidocaldarius  
Subspecies
  
Species Synonyms
  
Strain
HSU9  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 405212
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Firmicutes  
NCBI Class
Bacilli  
NCBI Order
Bacillales  
NCBI Family
Alicyclobacillaceae  
NCBI Genus
Alicyclobacillus  
NCBI Species
Alicyclobacillus acidocaldarius  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Thermal springs  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
Rod-shaped  
Motility
  
Sporulation
Sporulating  
Temperature Range
Thermophile  
Salinity
  
pH
3  
Cell Diameter
0.5 - 1.0 um  
Cell Length
1-2um  
Color
  
Gram Staining
Gram+  
Biotic Relationships Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Singles
Diseases
  
Known Habitats Hot spring
Aquatic
Fresh water
Metabolisms
  
Phenotypes Acidophile
Energy Sources Chemoorganotroph

 

 

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