PROJECT NAME
GOLD Project ID
Gp0014250  
Project Name
Vibrio campbellii DS40M4  
Other Names
  
Legacy ER Project ID
22838  
Legacy GOLD ID
Gi12101  
NCBI BioProject Name Vibrio campbellii DS40M4
NCBI BioProject ID 73409
NCBI BioProject Accession
PRJNA73409  
NCBI Locus Tag
  
NCBI BioSample Accession
SAMN02469786  
PI Fabiano L. Thompson
Added By Nikos Kyrpides on 2012-01-28
Last Modified By Auto script update processes on 2014-10-31
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Permanent Draft  
Project Relevance Environmental
Sequencing Center
  
Collaborating Institute Federal University of Rio de Janeiro (Brazil)
Funding Agency
  
Project Description
Vibrio campbellii is a marine bacteria containing a relevant iron system. produces the siderophores anguibactin and vanchrobactin  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications Journal of bacteriology 194(4):904 Genome sequence of the marine bacterium Vibrio campbellii DS40M4, isolated from open ocean water.
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Vibrio campbellii DS40M4
Analysis Projects Vibrio campbellii DS40M4
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 2: High-Quality Draft
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454-GS-FLX-Titanium
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
45  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0014250
Organism Name
Vibrio campbellii DS40M4  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-GAMMA  
Genus
Vibrio  
Genus Synonyms
  
Species
Vibrio campbellii  
Subspecies
  
Species Synonyms
  
Strain
DS40M4  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1088888
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Gammaproteobacteria  
NCBI Order
Vibrionales  
NCBI Family
Vibrionaceae  
NCBI Genus
Vibrio  
NCBI Species
Vibrio campbellii  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Marine  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Facultative  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Singles
Diseases None
Known Habitats Aquatic
Marine
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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