PROJECT NAME
GOLD Project ID
Gp0013996  
Project Name
Martelella mediterranea DSM 17316  
Other Names
  
Legacy ER Project ID
20807  
Legacy GOLD ID
Gi11659  
NCBI BioProject Name Martelella mediterranea DSM 17316
NCBI BioProject ID 169710
NCBI BioProject Accession
PRJNA169710  
NCBI Locus Tag
B038  
NCBI BioSample Accession
SAMN02441730  
PI Nikos Kyrpides
Added By JGI automated process on 2012-01-11
Last Modified By Auto script update processes on 2014-08-18
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Permanent Draft  
Project Relevance Comparative analysis
GEBA-KMG
Tree of Life
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute Leibniz Institute (Germany)
Funding Agency Leibniz Institute (Germany)
U.S. Department of Energy (DOE) (USA)
Project Description
Genomic Encyclopedia of Type Strains, Phase I: the one thousand microbial genomes (KMG) project  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
Isolation Publications
  
PROJECT COMPOSITION
Studies Genomic Encyclopedia of Type Strains, Phase I: the one thousand microbial genomes (KMG-I) project
Analysis Projects Martelella mediterranea DSM 17316
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 3: Improved-High-Quality Draft
Finishing Goal Level 1: Standard Draft
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
62  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0013996
Organism Name
Martelella mediterranea DSM 17316  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-ALPHA  
Genus
Martelella  
Genus Synonyms
  
Species
Martelella mediterranea  
Subspecies
  
Species Synonyms
  
Strain
DSM 17316  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
DSM 17316  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.9375  
Exemplar Name
Martelella mediterranea DSM 17316  
Taxon DOI
10.1601/tx.9375  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1122214
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Alphaproteobacteria  
NCBI Order
Rhizobiales  
NCBI Family
Aurantimonadaceae  
NCBI Genus
Martelella  
NCBI Species
Martelella mediterranea  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Non-marine Saline and Alkaline  
Ecosystem Subtype
Saline  
Specific Ecosystem
Thalassic  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Obligate aerobe  
Cell Shape
Rod-shaped  
Motility
Nonmotile  
Sporulation
Nonsporulating  
Temperature Range
  
Temperature Optimum
28 C  
Salinity
Halotolerant  
pH
5.0-8.5  
Cell Diameter
1.0-1.1 um  
Cell Length
1.3-1.5 um  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Aquatic
Saline water
Metabolisms
  
Phenotypes
  
Energy Sources
  
CYANOBACTERIA METADATA
Filaments
  
Filament Type
  
Differentiated Cells
  
Position Of Heterocysts
  
Cysts
  
Mode Of Reproduction
  
Trichome
  
Trichome Type
  
Carotenoids
  
Pigments
  
Phage Infectivity
  
Phage Type
  
Restriction Enzyme
  
Toxin Production
  
Toxin Type
  
Secondary Metabolites
  
Developmental Cycle
  
Branching
  
Gas Vesicles
  
Gas Vesicle Type
  
Diagnostic Inclusion Body Information
  
Extracellular Structures
  
Bloom Forming
  
Pigment Type
  
Complementary chromatic adaptation (CCA)
  
Medium Types
  

 

 

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