PROJECT NAME
GOLD Project ID
Gp0013797  
Project Name
Cajanus cajan  
Other Names
  
Legacy ER Project ID
20189  
Legacy GOLD ID
Gi10996  
NCBI BioProject Name Cajanus cajan
NCBI BioProject ID 72815
NCBI BioProject Accession
PRJNA72815  
NCBI Locus Tag
KK1  
NCBI BioSample Accession
  
PI Rajeev K Varshney
Added By Tatiparthi B. Reddy on 2011-12-14 00:00:00.0
Last Modified By Auto script update processes on 2015-11-06 00:00:00.0
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Permanent Draft  
Project Relevance Agricultural
Sequencing Center Beijing Genomics Institute (BGI) (China)
Collaborating Institute
  
Funding Agency Beijing Genomics Institute (BGI) (China)
International Crops Research Institute for the Semi-Arid Tropics (ICRISAT) (India)
National Science Foundation (NSF) (USA)
Project Description
Cajanus cajan Genome Sequencing  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications Nature biotechnology 30(1):83-9 Draft genome sequence of pigeonpea (Cajanus cajan), an orphan legume crop of resource-poor farmers.
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Cajanus cajan
Analysis Projects Cajanus cajan
SEQUENCING INFORMATION
Sequencing Status Draft
Sequencing Quality (MIGS-31) Level 2: High-Quality Draft
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina GA
Illumina HiSeq 2000
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
22  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0013797
Organism Name
Cajanus cajan  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
EUKARYAL  
Phylogeny
PLANTS-STREPTOPHYTA  
Genus
Cajanus  
Genus Synonyms
  
Species
Cajanus cajan  
Subspecies
  
Species Synonyms
  
Strain
  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 3821
NCBI Kingdom
Viridiplantae  
NCBI Phylum
Streptophyta  
NCBI Class
  
NCBI Order
Fabales  
NCBI Family
Fabaceae  
NCBI Genus
Cajanus  
NCBI Species
Cajanus cajan  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
10-35C  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Terrestrial
Metabolisms
  
Phenotypes
  
Energy Sources Photoautotroph

 

 

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