PROJECT NAME
GOLD Project ID
Gp0013617  
Project Name
Burkholderia nodosa DSM 21604  
Other Names
  
Legacy ER Project ID
20373  
Legacy GOLD ID
Gi11225  
NCBI BioProject Name Burkholderia nodosa DSM 21604
NCBI BioProject ID 165365
NCBI BioProject Accession
PRJNA165365  
NCBI Locus Tag
A3CW  
NCBI BioSample Accession
SAMN02584919  
PI Nikos Kyrpides
Added By JGI automated process on 2012-01-11
Last Modified By Auto script update processes on 2014-08-18
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Permanent Draft  
Project Relevance Agricultural
GEBA-KMG
Root Nodulating Bacteria (RNB)
Tree of Life
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute Leibniz Institute (Germany)
Funding Agency Leibniz Institute (Germany)
U.S. Department of Energy (DOE) (USA)
Project Description
Genomic Encyclopedia of Type Strains, Phase I: the one thousand microbial genomes (KMG) project  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information Characteristics
Database
  
Genome Publications
  
Other Publications
  
Isolation Publications
  
PROJECT COMPOSITION
Studies Genomic Encyclopedia of Type Strains, Phase I: the one thousand microbial genomes (KMG-I) project
Analysis Projects Burkholderia nodosa DSM 21604
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 2: High-Quality Draft
Finishing Goal Level 1: Standard Draft
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
64  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0013617
Organism Name
Burkholderia nodosa DSM 21604  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-BETA  
Genus
Burkholderia  
Genus Synonyms
  
Species
Burkholderia nodosa  
Subspecies
  
Species Synonyms
  
Strain
DSM 21604  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
DSM 21604  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.10642  
Exemplar Name
Burkholderia nodosa  
Taxon DOI
10.1601/tx.10642  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1121127
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Betaproteobacteria  
NCBI Order
Burkholderiales  
NCBI Family
Burkholderiaceae  
NCBI Genus
Paraburkholderia  
NCBI Species
Paraburkholderia nodosa  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Plants  
Ecosystem Type
Rhizoplane  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
Rod-shaped  
Motility
  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
0.5-0.8 um  
Cell Length
0.8-2.2  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 1
Term Symbiotic
Symbiotic Physical Interaction
Endosymbiotic extracellular  
Symbiotic Relationship
  
Symbiont Name
Mimosa scabrella  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Plants
Metabolisms Nitrogen fixation
Phenotypes Catalase positive
Energy Sources
  

 

 

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