PROJECT NAME
GOLD Project ID
Gp0013445  
Project Name
Pseudovibrio sp. FO-BEG1  
Other Names
  
Legacy ER Project ID
6211  
Legacy GOLD ID
Gc02044  
NCBI BioProject Name Pseudovibrio sp. FO-BEG1
NCBI BioProject ID 73563
NCBI BioProject Accession
PRJNA73563  
NCBI Locus Tag
PSE  
NCBI BioSample Accession
  
PI Schulz-Vogt,H.N
Added By Nikos Kyrpides on 2011-12-09 00:00:00.0
Last Modified By Jon Bertsch on 2014-04-08 00:00:00.0
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance
  
Sequencing Center
  
Collaborating Institute Max Planck Institute (Germany)
Funding Agency
  
Project Description
Isolated with Beggiatoa sp. from a black band diseased coral; is available as an axenic culture; metabolically versatile, facultative oligotroph  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications Environmental microbiology 15(7):2095-113 The genus Pseudovibrio contains metabolically versatile bacteria adapted for symbiosis.
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Pseudovibrio sp. FO-BEG1
Analysis Projects Pseudovibrio sp. FO-BEG1
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
52  
Chromosome Count
1  
Plasmid Count
1  
ORGANISM NAME
GOLD Organism ID Go0013445
Organism Name
Pseudovibrio sp. FO-BEG1  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-ALPHA  
Genus
Pseudovibrio  
Genus Synonyms
  
Species
Pseudovibrio sp. FO-BEG1  
Subspecies
  
Species Synonyms
  
Strain
FO-BEG1  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 911045
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Alphaproteobacteria  
NCBI Order
Rhodobacterales  
NCBI Family
Rhodobacteraceae  
NCBI Genus
Pseudovibrio  
NCBI Species
Pseudovibrio sp. FO-BEG1  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Cnidaria  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Facultative  
Cell Shape
Vibrio-shaped  
Motility
Motile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
28  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Aquatic
Metabolisms
  
Phenotypes
  
Energy Sources Heterotroph

 

 

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