PROJECT NAME
GOLD Project ID
Gp0012621  
Project Name
Sulfobacillus acidophilus TPY  
Other Names
  
Legacy ER Project ID
19946  
Legacy GOLD ID
Gc01970  
NCBI BioProject Name Sulfobacillus acidophilus TPY
NCBI BioProject ID 68423
NCBI BioProject Accession
PRJNA68423  
NCBI Locus Tag
TPY  
NCBI BioSample Accession
  
PI Xinhua Chen
Added By Nikos Kyrpides on 2011-09-16
Last Modified By Jon Bertsch on 2014-04-08
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Biotechnological
Sequencing Center Beijing Genomics Institute (BGI) (China)
Collaborating Institute
  
Funding Agency
  
Project Description
Sulfobacillus acidophilus strain TPY is a moderate thermoacidiphilic bacterium originally isolated from hydrothermal vent of the Pacific Ocean. Ferrous iron and sulfur oxidation in acidic environments are confirmed in strain TPY  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications Journal of bacteriology 193(19):5555-6 Complete genome analysis of Sulfobacillus acidophilus strain TPY, isolated from a hydrothermal vent in the Pacific Ocean.
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Sulfobacillus acidophilus TPY
Analysis Projects Sulfobacillus acidophilus TPY
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454-GS-FLX
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
57  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0012621
Organism Name
Sulfobacillus acidophilus TPY  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Sulfobacillus  
Genus Synonyms
  
Species
Sulfobacillus acidophilus  
Subspecies
  
Species Synonyms
  
Strain
TPY  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
No  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1051632
NCBI Kingdom
  
NCBI Phylum
Firmicutes  
NCBI Class
Clostridia  
NCBI Order
Clostridiales  
NCBI Family
Clostridiales Family XVII. Incertae Sedis  
NCBI Genus
Sulfobacillus  
NCBI Species
Sulfobacillus acidophilus  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Marine  
Ecosystem Subtype
Hydrothermal vents  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
Sporulating  
Temperature Range
Thermophile  
Temperature Optimum
50  
Salinity
  
pH
1.8  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases None
Known Habitats Aquatic
Hot spring
Hydrothermal vent
Soil
Metabolisms Iron oxidizer
Sulphide oxidizer
Phenotypes Acidophile
Energy Sources Autotroph
Mixotroph

 

 

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