PROJECT NAME
GOLD Project ID
Gp0012461  
Project Name
Streptococcus pseudopneumoniae IS7493  
Other Names
  
Legacy ER Project ID
19939  
Legacy GOLD ID
Gc01960  
NCBI BioProject Name Streptococcus pseudopneumoniae IS7493
NCBI BioProject ID 69547
NCBI BioProject Accession
PRJNA69547  
NCBI Locus Tag
SPPN  
NCBI BioSample Accession
  
PI Pillai,D.R.
Added By Nikos Kyrpides on 2011-09-09
Last Modified By Jon Bertsch on 2014-04-08
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Medical
Sequencing Center Public Health Agency of Canada (Canada)
Collaborating Institute
  
Funding Agency
  
Project Description
Study goals are genomic characterization of recently-described Streptococcus pseudopneumoniae and to compare its genome with pathogenic S. pneumoniae and less virulent S. mitis  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications Journal of bacteriology 193(21):6102-3 Whole-genome sequence of Streptococcus pseudopneumoniae isolate IS7493.
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Streptococcus pseudopneumoniae IS7493
Analysis Projects Streptococcus pseudopneumoniae IS7493
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454-GS-FLX
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
40  
Chromosome Count
1  
Plasmid Count
1  
ORGANISM NAME
GOLD Organism ID Go0012461
Organism Name
Streptococcus pseudopneumoniae IS7493  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Streptococcus  
Genus Synonyms
  
Species
Streptococcus pseudopneumoniae  
Subspecies
  
Species Synonyms
  
Strain
IS7493  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1054460
NCBI Kingdom
  
NCBI Phylum
Firmicutes  
NCBI Class
Bacilli  
NCBI Order
Lactobacillales  
NCBI Family
Streptococcaceae  
NCBI Genus
Streptococcus  
NCBI Species
Streptococcus pseudopneumoniae  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Human  
Ecosystem Type
Respiratory system  
Ecosystem Subtype
Pulmonary system  
Specific Ecosystem
Sputum  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Host
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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