PROJECT NAME
GOLD Project ID
Gp0012179  
Project Name
Toxoplasma gondii COUG  
Other Names
  
Legacy ER Project ID
19987  
Legacy GOLD ID
Gi10791  
NCBI BioProject Name Toxoplasma gondii COUG
NCBI BioProject ID 71479
NCBI BioProject Accession PRJNA71479
NCBI Locus Tag
TGCOUG  
NCBI BioSample Accession SAMN02953803
PI
Added By Ionna Pagani on 2011-10-06
Last Modified By Supratim Mukherjee on 2017-03-29
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center J. Craig Venter Institute (JCVI) (USA)
Collaborating Institute
  
Funding Agency
  
Project Description
New research on Toxoplasma gondii has revealed that there is more genetic variation than previously expected in lineages from North America and Europe. The population structure is strongly subdivided by geographic region into 14 major lineages. The T. gondii COUG strain will be sequenced to study genome variability within haplogroup 11.  
Project Information Visibility Public
EXTERNAL PROJECT LINKS
Project Information Toxoplasma
Database
  
Genome Publications
  
Other Publications
  
PROJECT COMPOSITION
Study Genome and transcriptome sequencing of Toxoplasma gondii ME49
Analysis Projects Toxoplasma gondii COUG
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina
454-GS-FLX-Titanium
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0012179
Organism Name
Toxoplasma gondii COUG  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
EUKARYAL  
Phylogeny
PROTISTS-APICOMPLEXA  
Genus
Toxoplasma  
Genus Synonyms
  
Species
Toxoplasma gondii  
Subspecies
  
Species Synonyms
  
Strain
COUG  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1074873
NCBI Superkingdom
Eukaryota  
NCBI Kingdom
  
NCBI Phylum
Apicomplexa  
NCBI Class
Coccidia  
NCBI Order
Eucoccidiorida  
NCBI Family
Sarcocystidae  
NCBI Genus
Toxoplasma  
NCBI Species
Toxoplasma gondii  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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