PROJECT NAME
GOLD Project ID
Gp0012157  
Project Name
Leisingera nanhaiensis NH52F, DSM 24252  
Other Names
  
Legacy ER Project ID
5985  
Legacy GOLD ID
Gi10857  
NCBI BioProject Name Sedimentitalea nanhaiensis DSM 24252
NCBI BioProject ID 78295
NCBI BioProject Accession
PRJNA78295  
NCBI Locus Tag
NANH  
NCBI BioSample Accession
SAMN02440717  
PI Hans-Peter Klenk
Added By Tatiparthi B. Reddy on 2011-10-12
Last Modified By Auto script update processes on 2014-08-18
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Permanent Draft  
Project Relevance Tree of Life
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute Leibniz Institute (Germany)
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Leisingera nanhaiensis DSM 24252 Genome sequencing  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Whole genome type strain sequences of the genera Phaeobacter and Leisingera
Analysis Projects Leisingera nanhaiensis NH52F, DSM 24252
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 3: Improved-High-Quality Draft
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454-GS-FLX-Titanium
Illumina HiSeq 2000
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
61  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0012157
Organism Name
Leisingera nanhaiensis NH52F, DSM 24252  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-ALPHA  
Genus
Leisingera  
Genus Synonyms
  
Species
Leisingera nanhaiensis  
Subspecies
  
Species Synonyms
  
Strain
NH52F, DSM 24252  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
ACTCC AB 208316  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.16866  
Exemplar Name
Leisingera nanhaiensis  
Taxon DOI
10.1601/tx.16866  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 571166
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Alphaproteobacteria  
NCBI Order
Rhodobacterales  
NCBI Family
Rhodobacteraceae  
NCBI Genus
Sedimentitalea  
NCBI Species
Sedimentitalea nanhaiensis  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Sediment  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Anaerobe  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
25C  
Salinity
Halophile  
pH
7 - 8.5  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Aquatic
Marine
Sand
Sea water
Sediment
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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