PROJECT NAME
GOLD Project ID
Gp0011289  
Project Name
Arcobacter trophiarum 64, LMG 25534  
Other Names
  
Legacy ER Project ID
2533  
Legacy GOLD ID
Gi09648  
NCBI BioProject Name Arcobacter trophiarum LMG 25534
NCBI BioProject ID 66831
NCBI BioProject Accession
PRJNA66831  
NCBI Locus Tag
ATR  
NCBI BioSample Accession
  
PI
Added By Ioanna Pagani on 2011-06-21
Last Modified By Konstantinos Liolios on 2011-06-21
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
incomplete  
Project Relevance
  
Sequencing Center U.S. Department of Agriculture (France)
Collaborating Institute
  
Funding Agency
  
Project Description
Arcobacter trophiarum LMG 25534 Genome sequencing project  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
PROJECT COMPOSITION
Studies Arcobacter trophiarum LMG 25534 Genome sequencing project
Analysis Projects
  
SEQUENCING INFORMATION
Sequencing Status In progress
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0011289
Organism Name
Arcobacter trophiarum 64, LMG 25534  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-EPSILON  
Genus
Arcobacter  
Genus Synonyms
  
Species
Arcobacter tophiarum  
Subspecies
  
Species Synonyms
  
Strain
64, LMG 25534, CCUG 59229  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
LMG 25534  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.21159  
Exemplar Name
Arcobacter trophiarum  
Taxon DOI
10.1601/tx.21159  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1032241
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Epsilonproteobacteria  
NCBI Order
Campylobacterales  
NCBI Family
Campylobacteraceae  
NCBI Genus
Arcobacter  
NCBI Species
Arcobacter trophiarum  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Mammals  
Ecosystem Type
Digestive system  
Ecosystem Subtype
Large intestine  
Specific Ecosystem
Fecal  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Microaerophilic  
Cell Shape
Rod-shaped  
Motility
  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
28C  
Salinity
  
pH
  
Cell Diameter
0.3-0.5um  
Cell Length
1.4?2.0um  
Color
White  
Gram Staining
Gram-  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Feces
Gastrointestinal tract
Host
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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