PROJECT NAME
GOLD Project ID
Gp0011201  
Project Name
Natronorubrum tibetense DSM 13204  
Other Names
  
Legacy ER Project ID
2518  
Legacy GOLD ID
Gi09602  
NCBI BioProject Name Natronorubrum tibetense GA33
NCBI BioProject ID 85145
NCBI BioProject Accession
PRJNA85145  
NCBI Locus Tag
NATTI  
NCBI BioSample Accession
SAMN02261315  
PI Iain Anderson
Added By Nikos Kyrpides on 2011-06-10
Last Modified By Auto script update processes on 2014-08-18
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Permanent Draft  
Project Relevance Biotechnological
Tree of Life
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Natronorubrum tibetense GA33 Genome sequencing  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information Isolation
Database
  
Genome Publications
  
Other Publications
  
Isolation Publications
  
PROJECT COMPOSITION
Studies Completing the genomic survey of haloarchaeal genomes (revised), part 2
Analysis Projects Natronorubrum tibetense DSM 13204
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 3: Improved-High-Quality Draft
Finishing Goal Level 2: High-Quality Draft
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina HiSeq 2000
Library Method (MIGS-28)
Illumina CLIP PE, Illumina Std PE  
Number Of Reads
18011258 (Std PE), 36622486 (CLP PE)  
Read Size
  
Vector
  
GC Percent
62  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0011201
Organism Name
Natronorubrum tibetense DSM 13204  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
ARCHAEAL  
Phylogeny
EURYARCHAEOTA-HALOBACTERIA  
Genus
Natronorubrum  
Genus Synonyms
  
Species
Natronorubrum tibetense  
Subspecies
  
Species Synonyms
  
Strain
DSM 13204  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
DSM 13204  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.357  
Exemplar Name
Natronorubrum tibetense  
Taxon DOI
10.1601/tx.357  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1114856
NCBI Kingdom
  
NCBI Phylum
Euryarchaeota  
NCBI Class
Halobacteria  
NCBI Order
Natrialbales  
NCBI Family
Natrialbaceae  
NCBI Genus
Natronorubrum  
NCBI Species
Natronorubrum tibetense  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Non-marine Saline and Alkaline  
Ecosystem Subtype
Alkaline  
Specific Ecosystem
Sediment  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID AB005656
Synonym List
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
Pleomorphic-shaped  
Motility
Nonmotile  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
45  
Salinity
Halophile  
pH
9.0 - 9.5  
Cell Diameter
  
Cell Length
  
Color
Red  
Gram Staining
Gram-  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Clusters
Diseases
  
Known Habitats Aquatic
Fresh water
Sediment
Metabolisms
  
Phenotypes
  
Energy Sources Chemoorganotroph

 

 

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