PROJECT NAME
GOLD Project ID
Gp0011188  
Project Name
Pyrococcus yayanosii CH1  
Other Names
  
Legacy ER Project ID
19586  
Legacy GOLD ID
Gc01804  
NCBI BioProject Name Pyrococcus yayanosii CH1
NCBI BioProject ID 66055
NCBI BioProject Accession
PRJNA66055  
NCBI Locus Tag
PYCH  
NCBI BioSample Accession
  
PI Xiang,X.
Added By Nikos Kyrpides on 2011-06-09
Last Modified By Jon Bertsch on 2014-04-08
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Biotechnological
Sequencing Center
  
Collaborating Institute Shanghai Jiao Tong University (China)
Funding Agency
  
Project Description
Pyrococcus yayanosii CH1 genome sequencing project  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications Journal of bacteriology 193(16):4297-8 Complete genome sequence of the obligate piezophilic hyperthermophilic archaeon Pyrococcus yayanosii CH1.
Other Publications
  
Isolation Publications
  
PROJECT COMPOSITION
Studies Pyrococcus yayanosii CH1
Analysis Projects Pyrococcus yayanosii CH1
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454-GS-FLX
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
52  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0011188
Organism Name
Pyrococcus yayanosii CH1  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
ARCHAEAL  
Phylogeny
EURYARCHAEOTA-THERMOCOCCI  
Genus
Pyrococcus  
Genus Synonyms
  
Species
Pyrococcus yayanosii  
Subspecies
  
Species Synonyms
  
Strain
CH1  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
JCM 16557  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.22736  
Exemplar Name
Pyrococcus yayanosii  
Taxon DOI
10.1601/tx.22736  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 529709
NCBI Kingdom
  
NCBI Phylum
Euryarchaeota  
NCBI Class
Thermococci  
NCBI Order
Thermococcales  
NCBI Family
Thermococcaceae  
NCBI Genus
Pyrococcus  
NCBI Species
Pyrococcus yayanosii  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Marine  
Ecosystem Subtype
Hydrothermal vents  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Obligate anaerobe  
Cell Shape
Coccus-shaped  
Motility
Motile  
Sporulation
Nonsporulating  
Temperature Range
Hyperthermophile  
Temperature Optimum
98  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases None
Known Habitats Aquatic
Hot spring
Hydrothermal vent
Marine
Metabolisms Sulfur respiration
Phenotypes Piezophile
Energy Sources
  

 

 

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