PROJECT NAME
GOLD Project ID
Gp0011114  
Project Name
Acetonema longum APO-1, DSM 6540  
Other Names
  
Legacy ER Project ID
2580  
Legacy GOLD ID
Gi09712  
NCBI BioProject Name Acetonema longum DSM 6540
NCBI BioProject ID 66109
NCBI BioProject Accession
PRJNA66109  
NCBI Locus Tag
ALO  
NCBI BioSample Accession
SAMN02469409  
PI
Added By Jakob Jansson on 2011-06-22
Last Modified By Auto script update processes on 2014-04-02
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center California Institute of Technology (USA)
Collaborating Institute Stanford University (USA)
Funding Agency
  
Project Description
Termite hindgut symbiont; homoacetogenic metabolism that plays an important role in termite metabolism.  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications EMBO J. 30(14):2972-81 Structural diversity of bacterial flagellar motors.
Other Publications
  
PROJECT COMPOSITION
Studies Acetonema longum DSM 6540
Analysis Projects Acetonema longum APO-1, DSM 6540
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
50  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0011114
Organism Name
Acetonema longum APO-1, DSM 6540  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Acetonema  
Genus Synonyms
  
Species
Acetonema longum  
Subspecies
  
Species Synonyms
  
Strain
APO-1, DSM 6540  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
DSM 6540  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.4376  
Exemplar Name
Acetonema longum  
Taxon DOI
10.1601/tx.4376  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1009370
NCBI Kingdom
  
NCBI Phylum
Firmicutes  
NCBI Class
Negativicutes  
NCBI Order
Selenomonadales  
NCBI Family
Sporomusaceae  
NCBI Genus
Acetonema  
NCBI Species
Acetonema longum  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Insecta  
Ecosystem Type
Digestive system  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 115665
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Anaerobe  
Cell Shape
Rod-shaped  
Motility
  
Sporulation
Sporulating  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Host
Insect
Metabolisms
  
Phenotypes Catalase positive
Energy Sources
  
CYANOBACTERIA METADATA
Filaments
  
Filament Type
  
Differentiated Cells
  
Position Of Heterocysts
  
Cysts
  
Mode Of Reproduction
  
Trichome
  
Trichome Type
  
Carotenoids
  
Pigments
  
Phage Infectivity
  
Phage Type
  
Restriction Enzyme
  
Toxin Production
  
Toxin Type
  
Secondary Metabolites
  
Developmental Cycle
  
Branching
  
Gas Vesicles
  
Gas Vesicle Type
  
Diagnostic Inclusion Body Information
  
Extracellular Structures
  
Bloom Forming
  
Pigment Type
  
Complementary chromatic adaptation (CCA)
  
Medium Types
  

 

 

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