PROJECT NAME
GOLD Project ID
Gp0010603  
Project Name
Clostridium clariflavum EBR 45, DSM 19732  
Other Names
  
Legacy ER Project ID
2120  
Legacy GOLD ID
Gc02052  
NCBI BioProject Name [Clostridium] clariflavum DSM 19732
NCBI BioProject ID 72805
NCBI BioProject Accession
PRJNA72805  
NCBI Locus Tag
Clocl  
NCBI BioSample Accession
SAMN02261428  
PI Izquierdo, Javier
Added By Ioanna Pagani on 2011-03-17
Last Modified By Auto script update processes on 2014-05-20
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Bioenergy
Biotechnological
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Clostridium clariflavum DSM 19732 Genome sequencing  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information
  
Database
  
Genome Publications 22675603
Other Publications
  
Isolation Publications
  
PROJECT COMPOSITION
Studies Clostridium clariflavum DSM 19732
Analysis Projects Clostridium clariflavum EBR 45, DSM 19732
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454-GS-FLX-Titanium
Illumina
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
36  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0010603
Organism Name
Clostridium clariflavum EBR 45, DSM 19732  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Clostridium  
Genus Synonyms
  
Species
Clostridium clariflavum  
Subspecies
  
Species Synonyms
  
Strain
EBR 45  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
DSM 19732  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.14475  
Exemplar Name
Clostridium clariflavum  
Taxon DOI
10.1601/tx.14475  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 720554
NCBI Kingdom
  
NCBI Phylum
Firmicutes  
NCBI Class
Clostridia  
NCBI Order
Clostridiales  
NCBI Family
Ruminococcaceae  
NCBI Genus
Ruminiclostridium  
NCBI Species
[Clostridium] clariflavum  
ISOLATION CLASSIFICATION
Ecosystem
Engineered  
Ecosystem Category
Wastewater  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
GENERAL PROPERTIES
Oxygen Requirement
Anaerobe  
Cell Shape
Rod-shaped  
Motility
Nonmotile  
Sporulation
Sporulating  
Temperature Range
Thermophile  
Temperature Optimum
55C  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Sludge
Wastewater
Metabolisms Cellulose degrader
Phenotypes
  
Energy Sources Chemoorganotroph

 

 

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