PROJECT NAME
GOLD Project ID
Gp0010430  
Project Name
Marinitoga piezophila KA3  
Other Names
  
Legacy ER Project ID
19145  
Legacy GOLD ID
Gi09135, Gc02084  
NCBI BioProject Name Marinitoga piezophila KA3
NCBI BioProject ID 66025
NCBI BioProject Accession
PRJNA66025  
NCBI Locus Tag
MARPI  
NCBI BioSample Accession
SAMN02261422  
PI Noll, Kenneth M.
Added By Nikos Kyrpides on 2011-03-05
Last Modified By Auto script update processes on 2014-05-20
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Environmental
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute University of Connecticut (USA)
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Marinitoga piezophila KA3 genome sequencing project.  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information Isolation
Database
  
Genome Publications Journal of bacteriology 194(21):5974-5 Complete genome sequence of the thermophilic, piezophilic, heterotrophic bacterium Marinitoga piezophila KA3.
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Protein structure adaptations and genome stability as reflected by species of the Thermotogales
Analysis Projects Marinitoga piezophila KA3
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454-GS-FLX-Titanium
Illumina HiSeq 2000
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
29  
Chromosome Count
1  
Plasmid Count
1  
ORGANISM NAME
GOLD Organism ID Go0010430
Organism Name
Marinitoga piezophila KA3  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
THERMOTOGAE  
Genus
Marinitoga  
Genus Synonyms
  
Species
Marinitoga piezophila  
Subspecies
  
Species Synonyms
  
Strain
KA3  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
DSM 14283  
Type Strain
Unknown  
Exemplar DOI
10.1601/ex.479  
Exemplar Name
Marinitoga piezophila  
Taxon DOI
10.1601/tx.479  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 443254
NCBI Kingdom
  
NCBI Phylum
Thermotogae  
NCBI Class
Thermotogae  
NCBI Order
Petrotogales  
NCBI Family
  
NCBI Genus
Marinitoga  
NCBI Species
Marinitoga piezophila  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Marine  
Ecosystem Subtype
Hydrothermal vents  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID AF326121
Synonym List
GENERAL PROPERTIES
Oxygen Requirement
Anaerobe  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
Nonsporulating  
Temperature Range
Thermophile  
Temperature Optimum
65  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases None
Known Habitats Aquatic
Deep sea
Hot spring
Hydrothermal vent
Marine
Metabolisms Sulfur reducer
Phenotypes Piezophile
Energy Sources Chemoorganotroph

 

 

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