PROJECT NAME
GOLD Project ID
Gp0010364  
Project Name
Burkholderia sp. TJI49  
Other Names
  
Legacy ER Project ID
19129  
Legacy GOLD ID
Gi09053  
NCBI BioProject Name Burkholderia sp. TJI49
NCBI BioProject ID 62545
NCBI BioProject Accession
PRJNA62545  
NCBI Locus Tag
B1M  
NCBI BioSample Accession
SAMN02471833  
PI
Added By Ioanna Pagani on 2011-02-23
Last Modified By Auto script update processes on 2014-03-26
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Permanent Draft  
Project Relevance Ecological
Plant Pathogen
Sequencing Center Beijing Genomics Institute (BGI) (China)
Collaborating Institute University of Karachi (Pakistan)
Funding Agency
  
Project Description
Species characterization is still unknown  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications World J. Microbiol. Biotechnol. 29(11):2033-44 Genome characterization of a novel Burkholderia cepacia complex genomovar isolated from dieback affected mango orchards.
Other Publications
  
PROJECT COMPOSITION
Studies Burkholderia sp. TJI49
Analysis Projects Burkholderia sp. TJI49
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina GAiix
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
67  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0010364
Organism Name
Burkholderia sp. TJI49  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-BETA  
Genus
Burkholderia  
Genus Synonyms
  
Species
Burkholderia sp. TJI49  
Subspecies
  
Species Synonyms
  
Strain
TJI49  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 32008
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Betaproteobacteria  
NCBI Order
Burkholderiales  
NCBI Family
Burkholderiaceae  
NCBI Genus
Burkholderia  
NCBI Species
  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Plants  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Facultative  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Host
Rhizosphere
Rhizosphere-colonizing
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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