PROJECT NAME
GOLD Project ID
Gp0010360  
Project Name
Vibrio brasiliensis CAIM 495, LMG 20546  
Other Names
  
Legacy ER Project ID
1956  
Legacy GOLD ID
Gi09000  
NCBI BioProject Name Vibrio brasiliensis LMG 20546
NCBI BioProject ID 61943
NCBI BioProject Accession
PRJNA61943  
NCBI Locus Tag
VIBR0546  
NCBI BioSample Accession
SAMN02952918  
PI
Added By Ioanna Pagani on 2011-02-16
Last Modified By Auto script update processes on 2014-08-18
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center U.S. Food and Drug Administration (USA)
Collaborating Institute
  
Funding Agency
  
Project Description
Vibrio brasiliensis LMG 20546 genome sequeuncing  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications International journal of systematic and evolutionary microbiology 62(Pt 8):1736-43 Vibrio caribbeanicus sp. nov., isolated from the marine sponge Scleritoderma cyanea.
Other Publications
  
PROJECT COMPOSITION
Studies Vibrio brasiliensis CAIM 495, LMG 20546
Analysis Projects Vibrio brasiliensis CAIM 495, LMG 20546
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454-GS-FLX-Titanium
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
46  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0010360
Organism Name
Vibrio brasiliensis CAIM 495, LMG 20546  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-GAMMA  
Genus
Vibrio  
Genus Synonyms
  
Species
Vibrio brasiliensis  
Subspecies
  
Species Synonyms
  
Strain
CAIM 495, LMG 20546  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
LMG 20546  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.2954  
Exemplar Name
Vibrio brasiliensis  
Taxon DOI
10.1601/tx.2954  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 945543
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Gammaproteobacteria  
NCBI Order
Vibrionales  
NCBI Family
Vibrionaceae  
NCBI Genus
Vibrio  
NCBI Species
Vibrio brasiliensis  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Mollusca  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
30c  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Host
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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