PROJECT NAME
GOLD Project ID
Gp0010301  
Project Name
Mycosphaerella graminicola STIR04 3.11.1  
Other Names
  
Legacy ER Project ID
1960  
Legacy GOLD ID
Gi09022  
NCBI BioProject Name Mycosphaerella graminicola STIR04 3.11.1
NCBI BioProject ID
  
NCBI BioProject Accession
  
NCBI Locus Tag
  
NCBI BioSample Accession
  
PI
Added By Ioanna Pagani on 2011-02-17
Last Modified By Nikos Kyrpides on 2011-02-20
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
incomplete  
Project Relevance Agricultural
Plant Pathogen
Sequencing Center Aarhus University (Denmark)
Collaborating Institute
  
Funding Agency
  
Project Description
Isolates collected from field populations in Iran Mycosphaerella is an important plant pathogenic fungus of wheat found worldwide where wheat is grown. The genome sequences used in this study have provided information about host specialization processes in the fungus.  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information Plant_Pathogen
Database
  
Genome Publications PLoS genetics 6(12):e1001189 Whole-genome and chromosome evolution associated with host adaptation and speciation of the wheat pathogen Mycosphaerella graminicola.
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Mycosphaerella graminicola comparative genomics project
Analysis Projects
  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 2: High-Quality Draft
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina GAii
Library Method (MIGS-28)
  
Number Of Reads
45000000 Illumina  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0008224
Organism Name
Mycosphaerella graminicola STIR04 3.11.1  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
EUKARYAL  
Phylogeny
FUNGI-ASCOMYCOTA  
Genus
Mycosphaerella  
Genus Synonyms
  
Species
Mycosphaerella graminicola  
Subspecies
  
Species Synonyms
  
Strain
STIR04 3.11.1  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 744267
NCBI Kingdom
Fungi  
NCBI Phylum
Ascomycota  
NCBI Class
Dothideomycetes  
NCBI Order
Capnodiales  
NCBI Family
Mycosphaerellaceae  
NCBI Genus
Zymoseptoria  
NCBI Species
Zymoseptoria pseudotritici  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Plants  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases Septoria leaf blotch
Known Habitats
  
Metabolisms
  
Phenotypes Pathogen
Energy Sources
  

 

 

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