PROJECT NAME
GOLD Project ID
Gp0009009  
Project Name
Lactococcus lactis lactis CV56  
Other Names
  
Legacy ER Project ID
18369  
Legacy GOLD ID
Gi08419, Gc01691  
NCBI BioProject Name Lactococcus lactis subsp. lactis CV56
NCBI BioProject ID 60377
NCBI BioProject Accession
PRJNA60377  
NCBI Locus Tag
CVCAS  
NCBI BioSample Accession
  
PI Jin Zhong
Added By Ioanna Pagani on 2010-11-24
Last Modified By Auto script update processes on 2014-03-26
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Biotechnological
Cheese production
Food industry
Medical
Sequencing Center Chinese National Human Genome Center at Shanghai (China)
Collaborating Institute
  
Funding Agency
  
Project Description
This microbe is a member of the lactic acid bacteria and produces lactic acid from sugars. It is found in many environments including plant and animal habitats. Lactococcus lactis is used as a starter culture for the production of cheese products (such as cheddar) and in milk fermentations and, as such, is one of the most important microbes in the food industry. Many of the important functions for fermentation are encoded on the many conjugative plasmids these bacteria contain. The degradation of casein, acidification by lactic acid, and production of flavor compounds, processes that are caused by the bacteria, contribute to the final product.  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information Wikipedia
Database
  
Genome Publications Journal of bacteriology 193(11):2886-7 Complete genome sequence of Lactococcus lactis subsp. lactis CV56, a probiotic strain isolated from the vaginas of healthy women.
Other Publications
  
Isolation Publications
  
PROJECT COMPOSITION
Studies Lactococcus lactis lactis CV56
Analysis Projects Lactococcus lactis lactis CV56
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454-GS-FLX
Library Method (MIGS-28)
  
Number Of Reads
233256  
Read Size
  
Vector
  
GC Percent
35  
Chromosome Count
1  
Plasmid Count
5  
ORGANISM NAME
GOLD Organism ID Go0009009
Organism Name
Lactococcus lactis lactis CV56  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Lactococcus  
Genus Synonyms
  
Species
Lactococcus lactis  
Subspecies
lactis  
Species Synonyms
  
Strain
CV56  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 929102
NCBI Kingdom
  
NCBI Phylum
Firmicutes  
NCBI Class
Bacilli  
NCBI Order
Lactobacillales  
NCBI Family
Streptococcaceae  
NCBI Genus
Lactococcus  
NCBI Species
Lactococcus lactis  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Human  
Ecosystem Type
Reproductive system  
Ecosystem Subtype
Vagina  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Facultative  
Cell Shape
Coccus-shaped  
Motility
Nonmotile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
40  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases None
Known Habitats Host
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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