PROJECT NAME
GOLD Project ID
Gp0008916  
Project Name
Spironucleus salmonicida NOR-1, ATCC 50377  
Other Names
  
Legacy ER Project ID
1789  
Legacy GOLD ID
Gi08498  
NCBI BioProject Name Spironucleus salmonicida
NCBI BioProject ID 60811
NCBI BioProject Accession
PRJNA60811  
NCBI Locus Tag
SSK  
NCBI BioSample Accession
SAMN02303460  
PI Jan Andersson
Added By Ioanna Pagani on 2010-12-13
Last Modified By Auto script update processes on 2015-11-06
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center Uppsala University (Sweden)
Collaborating Institute ANRT (France)
Funding Agency
  
Project Description
Spironucleus salmonicida is being developed as a model system to study the cell biology, virulence and evolution of diplomonads, a group of anaerobic diplokaryotic eukaryotes. This project will contribute to the understanding of the function and evolution of the eukaryotes in general.  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
PROJECT COMPOSITION
Studies Spironucleus salmonicida NOR-1, ATCC 50377
Analysis Projects Spironucleus salmonicida NOR-1, ATCC 50377
SEQUENCING INFORMATION
Sequencing Status Draft
Sequencing Quality (MIGS-31) Level 2: High-Quality Draft
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454
Solexa
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0008916
Organism Name
Spironucleus salmonicida NOR-1, ATCC 50377  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
EUKARYAL  
Phylogeny
UNCLASSIFIED  
Genus
Spironucleus  
Genus Synonyms
  
Species
Spironucleus salmonicida  
Subspecies
  
Species Synonyms
  
Strain
NOR-1, ATCC 50377  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
ATCC 50377  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 348837
NCBI Kingdom
  
NCBI Phylum
  
NCBI Class
  
NCBI Order
  
NCBI Family
Hexamitidae  
NCBI Genus
Spironucleus  
NCBI Species
Spironucleus salmonicida  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Mollusca  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Anaerobe  
Cell Shape
  
Motility
Motile  
Sporulation
  
Temperature Range
Psychrophile  
Temperature Optimum
10C  
Salinity
  
pH
  
Cell Diameter
5.7 um  
Cell Length
10.9 um  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases Systemic disease
Known Habitats Aquatic
Host
Marine
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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