PROJECT INFORMATION
GOLD Project ID
Gp0008892  
Project Name
Lactobacillus helveticus R0052  
Other Names
  
Legacy ER Project ID
17855  
Legacy GOLD ID
Gi07659, Gc02320  
NCBI BioProject Name Lactobacillus helveticus R0052
NCBI BioProject ID 51767
NCBI BioProject Accession PRJNA51767
NCBI Locus Tag
R0052  
NCBI BioSample Accession SAMN02603348
PI Thomas A. Tompkins
Added By Ionna Pagani on 2010-09-23
Last Modified By Alejandro Rodriguez Mojica on 2018-07-11
Project Comments
  
Project Status
Complete and Published  
Project Relevance Food industry
Biotechnological
Sequencing Center Institut Rosell Inc (International)
Collaborating Institute Genome Quebec (Canada)
Funding Agency
  
Project Description
Lactobacillus helveticus R0052 genome sequencing project  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications Journal of bacteriology 194(22):6349 Complete genome sequence of Lactobacillus helveticus R0052, a commercial probiotic strain.
Other Publications
  
PROJECT COMPOSITION
Study Lactobacillus helveticus R0052
Analysis Projects Lactobacillus helveticus R0052
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
37  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0008892
Organism Name
Lactobacillus helveticus R0052  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Lactobacillus  
Genus Synonyms
  
Species
Lactobacillus helveticus  
Subspecies
  
Species Synonyms
  
Strain
R0052  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 880633
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Firmicutes  
NCBI Class
Bacilli  
NCBI Order
Lactobacillales  
NCBI Family
Lactobacillaceae  
NCBI Genus
Lactobacillus  
NCBI Species
Lactobacillus helveticus  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Plants  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Facultative  
Cell Shape
Rod-shaped  
Motility
Nonmotile  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Chains
Diseases None
Known Habitats Intestinal tract
Metabolisms
  
Phenotypes Probiotic
Energy Sources
  

 

 

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