PROJECT INFORMATION
GOLD Project ID
Gp0008849  
Project Name
Corynebacterium pseudotuberculosis sv. II CIP52.97  
Other Names
  
Legacy ER Project ID
18472  
Legacy GOLD ID
Gi08524, Gc01992  
NCBI BioProject Name Corynebacterium pseudotuberculosis CIP52.97
NCBI BioProject ID 61117
NCBI BioProject Accession PRJNA61117
NCBI Locus Tag
CPCIP5297  
NCBI BioSample Accession
PI Artur Luiz Silva
Added By Ionna Pagani on 2010-12-14
Last Modified By Jon Bertsch on 2014-04-15
Project Comments
  
Project Status
Complete and Published  
Project Relevance Animal Pathogen
Medical
Sequencing Center Rede Paraense de Genomica e Proteomica (Brazil)
Collaborating Institute
  
Funding Agency
  
Project Description
Corynebacterium pseudotuberculosis, an important animal pathogen, is the etiological agent of a disease that is commonly called caseous lymphadenitis (CLA) or cheesy gland. This disease is found in all the world's major sheep and goat production areas, causing significant economic losses worldwide, mainly due to the reduction of wool, meat and milk yields, decreased reproductive efficiencies of affected animals and condemnation of carcasses and skins in abattoirs. In some cases, the infection produces few obvious clinical signs in the animal, remaining unrecognized until a post-mortem examination has been carried out and, making it difficult to obtain definitive data about prevalence of the disease.  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications Journal of bacteriology 193(24):7025-6 Complete genome sequence of Corynebacterium pseudotuberculosis strain CIP 52.97, isolated from a horse in Kenya.
Other Publications
  
PROJECT COMPOSITION
Study Genome Sequencing of Corynebacterium pseudotuberculosis - Rede Paraense de Genomica e Proteomica, Brazil
Analysis Projects Corynebacterium pseudotuberculosis sv. II CIP52.97
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) SOLiD
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
52  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0008849
Organism Name
Corynebacterium pseudotuberculosis sv. II CIP52.97  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
ACTINOBACTERIA  
Genus
Corynebacterium  
Genus Synonyms
  
Species
Corynebacterium pseudotuberculosis  
Subspecies
  
Species Synonyms
  
Strain
CIP52.97  
Strain Synonyms
  
Serovar-Biovar
II  
Culture Collection ID
CIP 52.97  
Type Strain
No  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 935697
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Actinobacteria  
NCBI Class
Actinobacteria  
NCBI Order
Corynebacteriales  
NCBI Family
Corynebacteriaceae  
NCBI Genus
Corynebacterium  
NCBI Species
Corynebacterium pseudotuberculosis  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Mammals  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Facultative  
Cell Shape
Rod-shaped  
Motility
Nonmotile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Singles
Diseases Lymphogranuloma vernerum
Known Habitats Host
Metabolisms
  
Phenotypes
  
Energy Sources Heterotroph
CYANOBACTERIA METADATA
Filaments
  
Filament Type
  
Differentiated Cells
  
Position Of Heterocysts
  
Cysts
  
Mode Of Reproduction
  
Trichome
  
Trichome Type
  
Carotenoids
  
Pigments
  
Phage Infectivity
  
Phage Type
  
Restriction Enzyme
  
Toxin Production
  
Toxin Type
  
Secondary Metabolites
  
Developmental Cycle
  
Branching
  
Gas Vesicles
  
Gas Vesicle Type
  
Diagnostic Inclusion Body Information
  
Extracellular Structures
  
Bloom Forming
  
Pigment Type
  
Complementary chromatic adaptation (CCA)
  
Medium Types
  

 

 

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