PROJECT NAME
GOLD Project ID
Gp0008439  
Project Name
Aspergillus fumigatus AF210  
Other Names
  
Legacy ER Project ID
17896  
Legacy GOLD ID
Gi07709  
NCBI BioProject Name Aspergillus fumigatus AF210
NCBI BioProject ID 52783
NCBI BioProject Accession
PRJNA52783  
NCBI Locus Tag
AFUD  
NCBI BioSample Accession
SAMN02981357  
PI
Added By Ioanna Pagani on 2010-09-24
Last Modified By Ioanna Pagani on 2010-09-24
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Permanent Draft  
Project Relevance Human Pathogen
Medical
Sequencing Center J. Craig Venter Institute (JCVI) (USA)
Collaborating Institute J. Craig Venter Institute (JCVI) (USA)
University of Manchester (United Kingdom)
Funding Agency
  
Project Description
Dr. Denning strain collection at the University of Manchester, UK The Aspergillus fumigatus (Neosartorya fumigata) strain AF210 (NCPF 7101) was isolated as a hospital acquired infection from an intensive care unit in Manchester, UK (Carlson et al., J Infect 1996;33:119). This and 5 other isolates, including an environmental strain from the same ICU, were shown to be identical. Experimental infection caused by AF210 responds to both amphotericin B and itraconazole, and has been used to validate susceptibility testing of azoles. It is more amenable to hygromycin-based transformation than AF293.  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information Wikipedia
Fungi at NCBI
Aspergillus web
Database
  
Genome Publications
  
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Aspergillus fumigatus AF210
Analysis Projects Aspergillus fumigatus AF210
SEQUENCING INFORMATION
Sequencing Status Draft
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454-GS-FLX-Titanium
Illumina
Sanger
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0008439
Organism Name
Aspergillus fumigatus AF210  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
EUKARYAL  
Phylogeny
FUNGI-ASCOMYCOTA  
Genus
Aspergillus  
Genus Synonyms
  
Species
Aspergillus fumigatus  
Subspecies
  
Species Synonyms
  
Strain
AF210  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
NCPF 7101  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 888744
NCBI Kingdom
Fungi  
NCBI Phylum
Ascomycota  
NCBI Class
Eurotiomycetes  
NCBI Order
Eurotiales  
NCBI Family
Aspergillaceae  
NCBI Genus
Aspergillus  
NCBI Species
Aspergillus fumigatus  
ISOLATION CLASSIFICATION
Ecosystem
Engineered  
Ecosystem Category
Built environment  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases Aspergillosis
Known Habitats Host
Metabolisms
  
Phenotypes Pathogen
Energy Sources
  

 

 

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