PROJECT NAME
GOLD Project ID
Gp0008262  
Project Name
Capnocytophaga canimorsus Cc5  
Other Names
  
Legacy ER Project ID
17494  
Legacy GOLD ID
Gi07266, Gc01889  
NCBI BioProject Name Capnocytophaga canimorsus Cc5
NCBI BioProject ID 50199
NCBI BioProject Accession
PRJNA50199  
NCBI Locus Tag
CCAN  
NCBI BioSample Accession
  
PI Guy R. Cornelis
Added By Ioanna Pagani on 2010-07-06
Last Modified By Jon Bertsch on 2014-04-08
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Medical
Sequencing Center
  
Collaborating Institute University of Basel (Switzerland)
Funding Agency
  
Project Description
Capnocytophaga canimorsus Cc5 genome sequencing project  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information Publication
Wikipedia
Database
  
Genome Publications Journal of bacteriology 193(19):5558-9 Complete genome sequence of the dog commensal and human pathogen Capnocytophaga canimorsus strain 5.
Other Publications
  
Isolation Publications
  
PROJECT COMPOSITION
Studies Capnocytophaga canimorsus Cc5
Analysis Projects Capnocytophaga canimorsus Cc5
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454
Illumina
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
36  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0008262
Organism Name
Capnocytophaga canimorsus Cc5  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
BACTEROIDETES  
Genus
Capnocytophaga  
Genus Synonyms
  
Species
Capnocytophaga canimorsus  
Subspecies
  
Species Synonyms
  
Strain
Cc5  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 860228
NCBI Kingdom
  
NCBI Phylum
Bacteroidetes  
NCBI Class
Flavobacteriia  
NCBI Order
Flavobacteriales  
NCBI Family
Flavobacteriaceae  
NCBI Genus
Capnocytophaga  
NCBI Species
Capnocytophaga canimorsus  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Human  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Microaerophilic  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases Disseminated intravascular coagulation (DIC)
Periodontitis
Sepsis
Zoonotic disease
Known Habitats Gingival crevices
Host
Metabolisms
  
Phenotypes Pathogen
Energy Sources Chemoorganotroph

 

 

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