PROJECT INFORMATION
GOLD Project ID
Gp0007296  
Project Name
Bifidobacterium longum longum JDM301  
Other Names
  
Legacy ER Project ID
17289  
Legacy GOLD ID
Gc01307  
NCBI BioProject Name Bifidobacterium longum subsp. longum JDM301
NCBI BioProject ID 47579
NCBI BioProject Accession PRJNA47579
NCBI Locus Tag
BLJ  
NCBI BioSample Accession
PI Guo X
Added By Ionna Pagani on 2010-06-22
Last Modified By Jon Bertsch on 2014-04-08
Project Comments
  
Project Status
Complete and Published  
Project Relevance Food industry
Sequencing Center Shanghai Jiao Tong University (China)
Collaborating Institute
  
Funding Agency
  
Project Description
found in adult humans and formula fed infants as a normal component of gut flora  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications Journal of bacteriology 192(15):4076-7 Complete genome sequence of Bifidobacterium longum JDM301.
Other Publications
  
PROJECT COMPOSITION
Study Bifidobacterium longum longum JDM301
Analysis Projects Bifidobacterium longum longum JDM301
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454
Library Method (MIGS-28)
  
Number Of Reads
192888  
Read Size
  
Vector
  
GC Percent
60  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0007296
Organism Name
Bifidobacterium longum longum JDM301  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
ACTINOBACTERIA  
Genus
Bifidobacterium  
Genus Synonyms
  
Species
Bifidobacterium longum  
Subspecies
longum  
Species Synonyms
  
Strain
JDM301  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 759350
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Actinobacteria  
NCBI Class
Actinobacteria  
NCBI Order
Bifidobacteriales  
NCBI Family
Bifidobacteriaceae  
NCBI Genus
Bifidobacterium  
NCBI Species
Bifidobacterium longum  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Unclassified  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
Rod-shaped  
Motility
Nonmotile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
37C  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases None
Known Habitats Host
Human vaginal microflora
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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