| PROJECT INFORMATION | |
|---|---|
GOLD Project ID
|
Gp0006904
|
|
Project Name
|
Mycoplasma putrefaciens KS1
|
|
Other Names
|
|
|
Legacy ER Project ID
|
16870
|
|
Legacy GOLD ID
|
Gi06347, Gc01928
|
| NCBI BioProject Name | Mycoplasma putrefaciens KS1 |
|
NCBI BioProject ID
|
46453 |
|
NCBI BioProject Accession
|
PRJNA46453 |
|
NCBI Locus Tag
|
MPUT
|
|
NCBI BioSample Accession
|
|
| PI | Calcutt MJ |
| Added By |
Nikos Kyrpides
on 2010-03-10 |
| Last Modified By |
JGI automated process
on 2014-03-26 |
| Project Comments |
|
|
Project Status
|
Complete and Published
|
|
Project Relevance
|
Human Pathogen Medical |
|
Sequencing Center
|
University of Michigan
(USA)
|
|
Collaborating Institute
|
|
|
Funding Agency
|
|
|
Project Description
|
Mycoplasma putrefaciens KS1 Genome sequencing
|
|
Project Information Visibility
|
Public |
| PROJECT TYPE | |
|
Specimen
|
Organism |
|
Nucleic Acid
|
DNA |
|
Sequencing Strategy
|
Whole Genome Sequencing
|
| EXTERNAL PROJECT LINKS | |
|
Project Information
|
|
|
Database
|
|
|
Genome Publications
|
Journal of bacteriology
193(21):6094
Genome sequence of Mycoplasma putrefaciens type strain KS1.
|
|
Other Publications
|
|
| PROJECT COMPOSITION | |
| Study |
Mycoplasma putrefaciens Abomsa-Mput |
| Analysis Projects |
Mycoplasma putrefaciens KS1 |
| Number of Analysis Projects |
1 |
| Number of DAPs |
0
|
| SEQUENCING INFORMATION | |
|---|---|
|
Sequencing Status
|
Complete |
| Sequencing Quality (MIGS-31) |
Level 6: Finished |
|
Finishing Goal
|
|
|
Sequencing Comments
|
|
|
Sequencing Technology
(MIGS-29)
|
454 GS FLX Titanium |
|
Library Method
(MIGS-28)
|
|
|
Number Of Reads
|
|
|
Read Size
|
|
|
Vector
|
|
| GC Percent |
27
|
| Chromosome Count |
1
|
| Plasmid Count |
|
| ORGANISM NAME | |
|---|---|
| GOLD Organism ID |
Go0006904 |
| Organism Name |
Mycoplasma putrefaciens KS1
|
| Other names (alias, synonyms, short names, common names) |
|
| Organism Domain |
BACTERIAL
|
| Phylogeny |
TENERICUTES
|
| Genus |
Mycoplasma
|
| Genus Synonyms |
|
| Species |
Mycoplasma putrefaciens
|
| Subspecies |
|
| Species Synonyms |
|
| Strain |
KS1
|
| Strain Synonyms |
|
| Serovar-Biovar |
|
| Culture Collection ID |
ATCC 15718
|
| Type Strain |
Yes
|
| Exemplar DOI |
10.1601/ex.4720
|
| Exemplar Name |
Mycoplasma putrefaciens
|
| Taxon DOI |
10.1601/tx.4720
|
| Biosafety Level |
2
|
| Organism Comments |
|
| Cultured |
Yes
|
| Culture Type |
Isolate
|
| Organism Type |
Natural
|
| Uncultured Type |
|
| Commercial Strain |
|
| Commercial Strain Comments |
|
|
ORGANISM TAXONOMY
|
|
| NCBI Taxonomy ID |
743965 |
| NCBI Superkingdom |
Bacteria
|
| NCBI Kingdom |
|
| NCBI Phylum |
Tenericutes
|
| NCBI Class |
Mollicutes
|
| NCBI Order |
Mycoplasmatales
|
| NCBI Family |
Mycoplasmataceae
|
| NCBI Genus |
Mycoplasma
|
| NCBI Species |
Mycoplasma putrefaciens
|
| ISOLATION CLASSIFICATION | |
| Ecosystem |
Host-associated
|
| Ecosystem Category |
Mammals
|
| Ecosystem Type |
Unclassified
|
| Ecosystem Subtype |
Unclassified
|
| Specific Ecosystem |
Unclassified
|
| ORGANISM EXTERNAL REFERENCES | |
| Strain Info ID |
|
| Genbank 16S ID |
U26055 |
| Synonym List |
|
| GENERAL PROPERTIES | |
|---|---|
| Oxygen Requirement |
Facultative
|
| Cell Shape |
Sphere-shaped
|
| Motility |
Motile
|
| Sporulation |
Nonsporulating
|
| Temperature Range |
Mesophile
|
| Temperature Optimum |
37
|
| Salinity |
|
| pH |
|
| Cell Diameter |
|
| Cell Length |
|
| Color |
|
| Gram Staining |
Gram+
|
| Biotic Relationships | Free living |
| Symbiotic Physical Interaction |
|
| Symbiotic Relationship |
|
| Symbiont Name |
|
| Symbiont Taxon ID |
|
| Cell Arrangements |
Singles |
| Diseases |
Pneumonia Tracheobronchitis Respiratory infection |
| Known Habitats |
Host |
| Metabolisms |
|
| Phenotypes |
Pathogen |
| Energy Sources |
|
You are going to add the following user to your project, biosample and study.
Contact Name/Email: Do you want to continue?
You are going to remove permissions for the following user to your project, biosample and study.
Contact Name/Email: Do you want to continue?
Changing the SP visibility will also change visibility on the following items:
Do you want to continue with this visibility change?
Checking that this Sequencing Project can be made private:
Do you want to continue with this visibility change?
