PROJECT INFORMATION | |
---|---|
GOLD Project ID
![]() |
Gp0006759
|
Project Name
![]() |
Candida tropicalis MYA-3404
|
Other Names
![]() |
|
Legacy ER Project ID
![]() |
12484
|
Legacy GOLD ID
![]() |
Gi00128
|
NCBI BioProject Name | Candida tropicalis MYA-3404 |
NCBI BioProject ID
![]() |
13675 |
NCBI BioProject Accession
![]() |
PRJNA13675 |
NCBI Locus Tag
![]() |
CTRG
|
NCBI BioSample Accession
![]() |
SAMN02953608 |
PI | |
Added By |
Nikos Kyrpides
on 2007-11-27 |
Last Modified By |
JGI automated process
on 2014-06-19 |
Project Comments |
|
Project Status
![]() |
Permanent Draft
|
Project Relevance
![]() |
Fungal Genome Initiative (FGI) Human Pathogen Medical |
Sequencing Center
![]() |
Broad Institute
(USA)
|
Collaborating Institute
![]() |
|
Funding Agency
![]() |
NIH
(USA)
|
Project Description
![]() |
WGS sequencing, assembly and annotation
|
Project Information Visibility
![]() |
Public |
PROJECT TYPE | |
Specimen
![]() |
Organism |
Nucleic Acid
![]() |
DNA |
Sequencing Strategy
![]() |
Whole Genome Sequencing
|
EXTERNAL PROJECT LINKS | |
Project Information
![]() |
|
Database
![]() |
|
Genome Publications
![]() |
Nature
459(7247):657-62
Evolution of pathogenicity and sexual reproduction in eight Candida genomes.
|
Other Publications
![]() |
|
PROJECT COMPOSITION | |
Study |
Candida tropicalis MYA-3404 |
Organism |
Candida tropicalis MYA-3404 |
Analysis Projects |
Candida tropicalis MYA-3404 |
Number of Analysis Projects |
1 |
Number of DAPs |
0
|
SEQUENCING INFORMATION | |
---|---|
Sequencing Status
![]() |
Complete |
Sequencing Quality (MIGS-31) |
|
Finishing Goal
![]() |
|
Sequencing Comments
![]() |
|
Sequencing Technology
(MIGS-29)
![]() |
Sanger |
Library Method
(MIGS-28)
![]() |
|
Number Of Reads
![]() |
|
Read Size
![]() |
|
Vector
![]() |
|
GC Percent |
33
|
Chromosome Count |
6
|
Plasmid Count |
0
|
ORGANISM NAME | |
---|---|
GOLD Organism ID |
Go0006759 |
Organism Name |
Candida tropicalis MYA-3404
|
Other names (alias, synonyms, short names, common names) |
|
Organism Domain |
EUKARYAL
|
Phylogeny |
FUNGI-ASCOMYCOTA
|
Genus |
Candida
|
Genus Synonyms |
|
Species |
Candida tropicalis
|
Subspecies |
|
Species Synonyms |
|
Strain |
MYA-3404
|
Strain Synonyms |
|
Serovar-Biovar |
|
Culture Collection ID |
|
Type Strain |
Unknown
|
Exemplar DOI |
|
Exemplar Name |
|
Taxon DOI |
|
Biosafety Level |
|
Organism Comments |
|
Cultured |
Yes
|
Culture Type |
Isolate
|
Organism Type |
Natural
|
Uncultured Type |
|
Commercial Strain |
|
Commercial Strain Comments |
|
ORGANISM TAXONOMY
![]() |
|
NCBI Taxonomy ID |
294747 |
NCBI Superkingdom |
Eukaryota
|
NCBI Kingdom |
Fungi
|
NCBI Phylum |
Ascomycota
|
NCBI Class |
Saccharomycetes
|
NCBI Order |
Saccharomycetales
|
NCBI Family |
Debaryomycetaceae
|
NCBI Genus |
Candida
|
NCBI Species |
Candida tropicalis
|
ISOLATION CLASSIFICATION | |
Ecosystem |
Host-associated
|
Ecosystem Category |
Unclassified
|
Ecosystem Type |
Unclassified
|
Ecosystem Subtype |
Unclassified
|
Specific Ecosystem |
Unclassified
|
ORGANISM EXTERNAL REFERENCES | |
Strain Info ID |
|
Genbank 16S ID |
|
GENERAL PROPERTIES | |
---|---|
Oxygen Requirement |
|
Cell Shape |
|
Motility |
|
Sporulation |
|
Temperature Range |
|
Temperature Optimum |
|
Salinity |
|
pH |
|
Cell Diameter |
|
Cell Length |
|
Color |
|
Gram Staining |
|
Biotic Relationships |
|
Symbiotic Physical Interaction |
|
Symbiotic Relationship |
|
Symbiont Name |
|
Symbiont Taxon ID |
|
Cell Arrangements |
|
Diseases |
Candidemia |
Known Habitats |
Host |
Metabolisms |
|
Phenotypes |
Pathogen |
Energy Sources |
|
CYANOBACTERIA METADATA | |
Filaments |
|
Filament Type |
|
Differentiated Cells |
|
Position Of Heterocysts |
|
Cysts |
|
Mode Of Reproduction |
|
Trichome |
|
Trichome Type |
|
Carotenoids |
|
Pigments |
|
Phage Infectivity |
|
Phage Type |
|
Restriction Enzyme |
|
Toxin Production |
|
Toxin Type |
|
Secondary Metabolites |
|
Developmental Cycle |
|
Branching |
|
Gas Vesicles |
|
Gas Vesicle Type |
|
Diagnostic Inclusion Body Information |
|
Extracellular Structures |
|
Bloom Forming |
|
Pigment Type |
|
Complementary chromatic adaptation (CCA) |
|
Medium Types |
|
You are going to add the following user to your project, biosample and study.
Contact Name/Email: Do you want to continue?
You are going to remove permissions for the following user to your project, biosample and study.
Contact Name/Email: Do you want to continue?
Changing the SP visibility will also change visibility on the following items:
Do you want to continue with this visibility change?
Checking that this Sequencing Project can be made private:
Do you want to continue with this visibility change?