PROJECT NAME
GOLD Project ID
Gp0006683  
Project Name
Borrelia burgdorferi JD1  
Other Names
  
Legacy ER Project ID
10928  
Legacy GOLD ID
Gi00786, Gc01392  
NCBI BioProject Name Borrelia burgdorferi JD1
NCBI BioProject ID 29359
NCBI BioProject Accession
PRJNA29359  
NCBI Locus Tag
BBUJD1  
NCBI BioSample Accession
  
PI Qiu W-G
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Auto script update processes on 2014-03-26
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Human Pathogen
Medical
Sequencing Center J. Craig Venter Institute (JCVI) (USA)
Collaborating Institute Stony Brook University
City University of New York
Funding Agency NIH (USA)
Project Description
Well-studied infectious strain  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information Reference
Database
  
Genome Publications Journal of bacteriology 193(4):1018-20 Whole-genome sequences of thirteen isolates of Borrelia burgdorferi.
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Whole-genome sequences of thirteen isolates of Borrelia burgdorferi
Analysis Projects Borrelia burgdorferi JD1
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
28  
Chromosome Count
1  
Plasmid Count
20  
ORGANISM NAME
GOLD Organism ID Go0006683
Organism Name
Borrelia burgdorferi JD1  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
SPIROCHAETES  
Genus
Borrelia  
Genus Synonyms
  
Species
Borrelia burgdorferi  
Subspecies
  
Species Synonyms
  
Strain
JD1  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 521008
NCBI Kingdom
  
NCBI Phylum
Spirochaetes  
NCBI Class
Spirochaetia  
NCBI Order
Spirochaetales  
NCBI Family
Borreliaceae  
NCBI Genus
Borreliella  
NCBI Species
Borreliella burgdorferi  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Insecta  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Microaerophilic  
Cell Shape
Spiral-shaped  
Motility
Motile  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
Ixodes scapularis  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases Lyme disease
Tick-borne relapsing fever
Known Habitats Host
Metabolisms
  
Phenotypes Pathogen
Energy Sources
  

 

 

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