PROJECT INFORMATION
GOLD Project ID
Gp0006216  
Project Name
Lactobacillus johnsonii FI9785  
Other Names
  
Legacy ER Project ID
15932  
Legacy GOLD ID
Gc01114  
NCBI BioProject Name Lactobacillus johnsonii FI9785
NCBI BioProject ID 36575
NCBI BioProject Accession PRJEA36575
NCBI Locus Tag
FI9785  
NCBI BioSample Accession SAMEA2272487
PI Wegmann U
Added By Nikos Kyrpides on 2009-09-28
Last Modified By Alejandro Rodriguez Mojica on 2018-07-10
Project Comments
  
Project Status
Complete and Published  
Project Relevance Comparative analysis
Medical
Sequencing Center Institute of Food Research (United Kingdom)
Collaborating Institute Bielefeld University (Germany)
Funding Agency
  
Project Description
This strain will be used for comparative genome analysis  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications Journal of bacteriology 191(22):7142-3 Complete genome sequence of Lactobacillus johnsonii FI9785, a competitive exclusion agent against pathogens in poultry.
Other Publications
  
PROJECT COMPOSITION
Study Lactobacillus johnsonii FI9785
Analysis Projects Lactobacillus johnsonii FI9785
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454
Library Method (MIGS-28)
  
Number Of Reads
708584 pyrosequence  
Read Size
  
Vector
  
GC Percent
34  
Chromosome Count
1  
Plasmid Count
2  
ORGANISM NAME
GOLD Organism ID Go0006216
Organism Name
Lactobacillus johnsonii FI9785  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Lactobacillus  
Genus Synonyms
  
Species
Lactobacillus johnsonii  
Subspecies
  
Species Synonyms
  
Strain
FI9785  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 633699
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Firmicutes  
NCBI Class
Bacilli  
NCBI Order
Lactobacillales  
NCBI Family
Lactobacillaceae  
NCBI Genus
Lactobacillus  
NCBI Species
Lactobacillus johnsonii  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Birds  
Ecosystem Type
Digestive system  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Microaerophilic  
Cell Shape
Rod-shaped  
Motility
Nonmotile  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Chains
Diseases None
Known Habitats Host
Human vaginal microflora
Metabolisms
  
Phenotypes
  
Energy Sources Heterotroph

 

 

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