PROJECT NAME
GOLD Project ID
Gp0005722  
Project Name
Homo sapiens CEPH HapMap population (1000 Genomes)  
Other Names
  
Legacy ER Project ID
16002  
Legacy GOLD ID
Gi05427  
NCBI BioProject Name Whole genome sequencing of (CEU) Utah residents with ancestry from Northern and Western Europe - CEPH - HapMap population
NCBI BioProject ID 33831
NCBI BioProject Accession
PRJNA33831  
NCBI Locus Tag
C5W  
NCBI BioSample Accession
  
PI
Added By Nikos Kyrpides on 2009-10-26
Last Modified By Nikos Kyrpides on 2010-02-11
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
incomplete  
Project Relevance 1000 Genomes
Sequencing Center
  
Collaborating Institute 1000 genomes
Funding Agency
  
Project Description
1000 Genomes WGS sequencing of the CEPH population: Utah residents with ancestry from Northern and Western Europe (CEU)  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies The 1000 Genomes Project
Analysis Projects
  
SEQUENCING INFORMATION
Sequencing Status In progress
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0005722
Organism Name
Homo sapiens CEPH HapMap population (1000 Genomes)  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
EUKARYAL  
Phylogeny
CHORDATA  
Genus
Homo  
Genus Synonyms
  
Species
Homo sapiens  
Subspecies
  
Species Synonyms
  
Strain
CEPH HapMap population (1000 Genomes)  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 9606
NCBI Kingdom
Metazoa  
NCBI Phylum
Chordata  
NCBI Class
Mammalia  
NCBI Order
Primates  
NCBI Family
Hominidae  
NCBI Genus
Homo  
NCBI Species
Homo sapiens  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
36  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Host
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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