PROJECT INFORMATION
GOLD Project ID
Gp0005483  
Project Name
Hydrogenobaculum sp. SN  
Other Names
  
Legacy ER Project ID
15092  
Legacy GOLD ID
Gi04589, Gc0015092  
NCBI BioProject Name Hydrogenobaculum sp. SN
NCBI BioProject ID 39709
NCBI BioProject Accession PRJNA39709
NCBI Locus Tag
HydSN  
NCBI BioSample Accession SAMN02232032
PI Timothy McDermott
Added By Nikos Kyrpides on 2009-07-30
Last Modified By Jon Bertsch on 2014-04-08
Project Comments
  
Project Status
Complete and Published  
Project Relevance Biotechnological
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information
  
Database
  
Genome Publications 23435891
Other Publications
  
PROJECT COMPOSITION
Study Hydrogenobaculum Population Genomics
Analysis Projects Hydrogenobaculum sp. SN
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina
454
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
35  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0005483
Organism Name
Hydrogenobaculum sp. SN  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
AQUIFICAE  
Genus
Hydrogenobaculum  
Genus Synonyms
  
Species
Hydrogenobaculum sp. SN  
Subspecies
  
Species Synonyms
  
Strain
SN  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 547146
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Aquificae  
NCBI Class
Aquificae  
NCBI Order
Aquificales  
NCBI Family
Aquificaceae  
NCBI Genus
Hydrogenobaculum  
NCBI Species
Hydrogenobaculum sp. SN  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
Nonsporulating  
Temperature Range
Thermophile  
Temperature Optimum
58  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases None
Known Habitats Fresh water
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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