PROJECT NAME
GOLD Project ID
Gp0004824  
Project Name
Stanieria cyanosphaera PCC 7437  
Other Names
  
Legacy ER Project ID
14842  
Legacy GOLD ID
Gi04320, Gc02428  
NCBI BioProject Name Stanieria cyanosphaera PCC 7437
NCBI BioProject ID 158877
NCBI BioProject Accession
PRJNA158877  
NCBI Locus Tag
Sta7437  
NCBI BioSample Accession
SAMN02261352  
PI Cheryl Kerfeld
Added By Nikos Kyrpides on 2009-05-10
Last Modified By Auto script update processes on 2014-05-20
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance GEBA-PCC
Tree of Life
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
The CyanoGEBA Sequencing Project is part of the DOE Joint Genome Institute?s Genomic Encyclopedia of Bacteria and Archaea initiative. The CyanoGEBA project is a collaboration between the JGI and the Pasteur Culture Collection aimed at improving sequencing coverage of the cyanobacterial phylum based on phylogenetic criteria.  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information
  
Database
  
Genome Publications Proceedings of the National Academy of Sciences of the United States of America 110(3):1053-8 Improving the coverage of the cyanobacterial phylum using diversity-driven genome sequencing.
Other Publications
  
PROJECT COMPOSITION
Studies GEBA-PCC
Analysis Projects Stanieria cyanosphaera PCC 7437
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454
Illumina
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
36  
Chromosome Count
1  
Plasmid Count
5  
ORGANISM NAME
GOLD Organism ID Go0004824
Organism Name
Stanieria cyanosphaera PCC 7437  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
CYANOBACTERIA  
Genus
Stanieria  
Genus Synonyms
  
Species
Stanieria cyanosphaera  
Subspecies
  
Species Synonyms
  
Strain
PCC 7437  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
PCC 7437  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.668  
Exemplar Name
Stanieria sp  
Taxon DOI
10.1601/tx.668  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 111780
NCBI Kingdom
  
NCBI Phylum
Cyanobacteria  
NCBI Class
  
NCBI Order
Pleurocapsales  
NCBI Family
Dermocarpellaceae  
NCBI Genus
Stanieria  
NCBI Species
Stanieria cyanosphaera  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Freshwater  
Ecosystem Subtype
Ponds  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
Motile  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
30um  
Cell Length
3-4um  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases None
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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