PROJECT NAME
GOLD Project ID
Gp0004423  
Project Name
Spirochaeta thermophila Z-1203, DSM 6578  
Other Names
  
Legacy ER Project ID
14457  
Legacy GOLD ID
Gi03957, Gc01897  
NCBI BioProject Name Spirochaeta thermophila DSM 6578
NCBI BioProject ID 50823
NCBI BioProject Accession
PRJNA50823  
NCBI Locus Tag
Spith  
NCBI BioSample Accession
SAMN00191235  
PI Jonathan Eisen
Added By Nikos Kyrpides on 2009-01-18
Last Modified By Jon Bertsch on 2014-04-08
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance GEBA
Tree of Life
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute Leibniz Institute (Germany)
Funding Agency Leibniz Institute (Germany)
U.S. Department of Energy (DOE) (USA)
Project Description
Spirochaeta thermophila DSM 6578 genome sequencing project  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information
  
Database
  
Genome Publications Journal of bacteriology 192(24):6492-3 Genome sequence of the polysaccharide-degrading, thermophilic anaerobe Spirochaeta thermophila DSM 6192.
Other Publications
  
PROJECT COMPOSITION
Studies A Genomic Encyclopedia of Bacteria and Archaea (GEBA)
Analysis Projects Spirochaeta thermophila Z-1203, DSM 6578
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454
Illumina GAii
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
61  
Chromosome Count
1  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0004423
Organism Name
Spirochaeta thermophila Z-1203, DSM 6578  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
SPIROCHAETES  
Genus
Spirochaeta  
Genus Synonyms
  
Species
Spirochaeta thermophila  
Subspecies
  
Species Synonyms
  
Strain
Z-1203, DSM 6578  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
DSM 6578  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.7811  
Exemplar Name
Spirochaeta thermophila  
Taxon DOI
10.1601/tx.7811  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 869211
NCBI Kingdom
  
NCBI Phylum
Spirochaetes  
NCBI Class
Spirochaetia  
NCBI Order
Spirochaetales  
NCBI Family
Spirochaetaceae  
NCBI Genus
Spirochaeta  
NCBI Species
Spirochaeta thermophila  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Thermal springs  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID X62809
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Anaerobe  
Cell Shape
Spiral-shaped  
Motility
Motile  
Sporulation
  
Temperature Range
Hyperthermophile  
Temperature Optimum
65  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases None
Known Habitats Aquatic
Hot spring
Marine
Metabolisms Cellulose degrader
Utilize carbohydrates
Xylan degrader
Phenotypes
  
Energy Sources
  

 

 

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