PROJECT INFORMATION
GOLD Project ID
Gp0003405  
Project Name
Methylacidiphilum infernorum V4  
Other Names
  
Legacy ER Project ID
75  
Legacy GOLD ID
Gi03053, Gc00812  
NCBI BioProject Name Methylacidiphilum infernorum V4
NCBI BioProject ID 28995
NCBI BioProject Accession PRJNA28995
NCBI Locus Tag
Minf  
NCBI BioSample Accession SAMN02604183
PI Alam M
Added By Nikos Kyrpides on 2008-03-19
Last Modified By JGI automated process on 2014-03-26
Project Comments
  
Project Status
Complete and Published  
Project Relevance
  
Sequencing Center University of Hawaii (USA)
Collaborating Institute
  
Funding Agency University of Hawaii (USA)
Project Description
Methane-consuming bacterium  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information Entrez
Taxonomy
Isolation
Database
  
Genome Publications Biology direct 3(26):26 Complete genome sequence of the extremely acidophilic methanotroph isolate V4, Methylacidiphilum infernorum, a representative of the bacterial phylum Verrucomicrobia.
Other Publications
  
PROJECT COMPOSITION
Study Methylacidiphilum infernorum V4
Analysis Projects Methylacidiphilum infernorum V4
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29) Sanger
Library Method (MIGS-28)
3 Kb  
Number Of Reads
  
Read Size
  
Vector
pUC18  
GC Percent
45  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0003405
Organism Name
Methylacidiphilum infernorum V4  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
VERRUCOMICROBIA  
Genus
Methylacidiphilum  
Genus Synonyms
  
Species
Methylacidiphilum infernorum  
Subspecies
  
Species Synonyms
  
Strain
V4  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 481448
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Verrucomicrobia  
NCBI Class
Methylacidiphilae  
NCBI Order
Methylacidiphilales  
NCBI Family
Methylacidiphilaceae  
NCBI Genus
Methylacidiphilum  
NCBI Species
Methylacidiphilum infernorum  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Terrestrial  
Ecosystem Type
Soil  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
Thermophile  
Temperature Optimum
60C  
Salinity
  
pH
2-2.5 (optimum)  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases None
Known Habitats Hot spring
Metabolisms
  
Phenotypes Acidophile
Energy Sources Methanotroph
Autotroph

 

 

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