PROJECT NAME
GOLD Project ID
Gp0003051  
Project Name
Oryzias latipes HNI  
Other Names
  
Legacy ER Project ID
12966  
Legacy GOLD ID
Gi01531  
NCBI BioProject Name Oryzias latipes
NCBI BioProject ID 19569
NCBI BioProject Accession
PRJNA19569  
NCBI Locus Tag
  
NCBI BioSample Accession
SAMD00036522  
PI
Added By Nikos Kyrpides on 2007-11-27
Last Modified By
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center National Institute of Genetics, Japan (Japan)
Collaborating Institute
  
Funding Agency
  
Project Description
Draft genome sequence of Oryzias latipes (medaka) strain HNI  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information Entrez
Taxonomy
Publication
Database
  
Genome Publications Nature The medaka draft genome and insights into vertebrate genome evolution.
Other Publications
  
PROJECT COMPOSITION
Studies Oryzias latipes HNI
Analysis Projects Oryzias latipes HNI
SEQUENCING INFORMATION
Sequencing Status Draft
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Sanger
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
48  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0003051
Organism Name
Oryzias latipes HNI  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
EUKARYAL  
Phylogeny
CHORDATA  
Genus
Oryzias  
Genus Synonyms
  
Species
Oryzias latipes  
Subspecies
  
Species Synonyms
  
Strain
HNI  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 8090
NCBI Kingdom
Metazoa  
NCBI Phylum
Chordata  
NCBI Class
Actinopteri  
NCBI Order
Beloniformes  
NCBI Family
Adrianichthyidae  
NCBI Genus
Oryzias  
NCBI Species
Oryzias latipes  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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