PROJECT INFORMATION
GOLD Project ID
Gp0002336  
Project Name
Sulfolobus islandicus M.16.4  
Other Names
  
Legacy ER Project ID
12227  
Legacy GOLD ID
Gi01314, Gc01006  
NCBI BioProject Name Sulfolobus islandicus M.16.4
NCBI BioProject ID 18807
NCBI BioProject Accession PRJNA18807
NCBI Locus Tag
M164  
NCBI BioSample Accession SAMN02598414
PI Whitaker, Rachel
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Jon Bertsch on 2014-04-08
Project Comments
  
Project Status
Complete and Published  
Project Relevance Biotechnological
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Isolated from a hot spring on the Kamchatka Penninsula  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information
  
Database
  
Genome Publications Proceedings of the National Academy of Sciences of the United States of America 106(21):8605-10 Biogeography of the Sulfolobus islandicus pan-genome.
Other Publications
  
PROJECT COMPOSITION
Study LGT in Sulfolobus islandicus
Analysis Projects Sulfolobus islandicus M.16.4
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29) Sanger
Library Method (MIGS-28)
3-, 8-, and 40-kbp libraries  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
35  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0002336
Organism Name
Sulfolobus islandicus M.16.4  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
ARCHAEAL  
Phylogeny
CRENARCHAEOTA-THERMOPROTEI  
Genus
Sulfolobus  
Genus Synonyms
  
Species
Sulfolobus islandicus  
Subspecies
  
Species Synonyms
  
Strain
M.16.4  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 426118
NCBI Superkingdom
Archaea  
NCBI Kingdom
  
NCBI Phylum
Crenarchaeota  
NCBI Class
Thermoprotei  
NCBI Order
Sulfolobales  
NCBI Family
Sulfolobaceae  
NCBI Genus
Sulfolobus  
NCBI Species
Sulfolobus islandicus  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Terrestrial  
Ecosystem Type
Volcanic  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
Coccus-shaped  
Motility
Nonmotile  
Sporulation
Nonsporulating  
Temperature Range
Thermophile  
Temperature Optimum
75 - 85  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Singles
Diseases None
Known Habitats Fresh water
Metabolisms
  
Phenotypes Acidophile
Energy Sources Lithotroph

 

 

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