PROJECT NAME
GOLD Project ID
Gp0002135  
Project Name
Mariprofundus ferrooxydans PV-1  
Other Names
  
Legacy ER Project ID
12037  
Legacy GOLD ID
Gi00906  
NCBI BioProject Name Mariprofundus ferrooxydans PV-1
NCBI BioProject ID 13615
NCBI BioProject Accession
PRJNA13615  
NCBI Locus Tag
SPV  
NCBI BioSample Accession
SAMN02436127  
PI
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Auto script update processes on 2014-03-26
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Permanent Draft  
Project Relevance Environmental
Marine Microbial Initiative (MMI)
Sequencing Center J. Craig Venter Institute (JCVI) (USA)
Collaborating Institute Woods Hole Oceanographic Institution
Funding Agency Gordon and Betty Moore Foundation Marine Microbiology Initiative (USA)
Project Description
Fe oxidizer, also forms Fe minerals, important in geological record  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information Information
Entrez
Taxonomy
Database
  
Genome Publications
  
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Mariprofundus ferrooxydans PV-1
Analysis Projects Mariprofundus ferrooxydans PV-1
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Sanger
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
54  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0002135
Organism Name
Mariprofundus ferrooxydans PV-1  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-ZETA  
Genus
Mariprofundus  
Genus Synonyms
Siderooxidans  
Species
Mariprofundus ferrooxydans  
Subspecies
  
Species Synonyms
marinum  
Strain
PV-1  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.20067  
Exemplar Name
Mariprofundus ferrooxydans  
Taxon DOI
10.1601/tx.20067  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 314345
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Zetaproteobacteria  
NCBI Order
Mariprofundales  
NCBI Family
Mariprofundaceae  
NCBI Genus
Mariprofundus  
NCBI Species
Mariprofundus ferrooxydans  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Marine  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases None
Known Habitats Marine
Metabolisms Iron oxidizer
Phenotypes
  
Energy Sources Chemolithoautotroph

 

 

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