PROJECT NAME
GOLD Project ID
Gp0001891  
Project Name
Fibrobacter succinogenes S85  
Other Names
  
Legacy ER Project ID
14468  
Legacy GOLD ID
Gi03969, Gc01125  
NCBI BioProject Name Fibrobacter succinogenes subsp. succinogenes S85
NCBI BioProject ID 32617
NCBI BioProject Accession
PRJNA32617  
NCBI Locus Tag
Fisuc  
NCBI BioSample Accession
SAMN02598491  
PI David Mead
Added By Nikos Kyrpides on 2009-01-22 00:00:00.0
Last Modified By Auto script update processes on 2014-05-20 00:00:00.0
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Biotechnological
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Rumen cellulolytic bacteria  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information Reference
Database
  
Genome Publications PloS one 6(4):e18814 The complete genome sequence of Fibrobacter succinogenes S85 reveals a cellulolytic and metabolic specialist.
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Novel Microbial Enzymes
Analysis Projects Fibrobacter succinogenes S85
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454-GS-FLX
Illumina GAii
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
48  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0001891
Organism Name
Fibrobacter succinogenes S85  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
FIBROBACTERES  
Genus
Fibrobacter  
Genus Synonyms
  
Species
Fibrobacter succinogenes  
Subspecies
succinogenes  
Species Synonyms
  
Strain
S85  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
ATCC 19169  
Type Strain
Unknown  
Exemplar DOI
10.1601/ex.7986  
Exemplar Name
Fibrobacter succinogenes  
Taxon DOI
10.1601/tx.10719  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 59374
NCBI Kingdom
  
NCBI Phylum
Fibrobacteres  
NCBI Class
Fibrobacteria  
NCBI Order
Fibrobacterales  
NCBI Family
Fibrobacteraceae  
NCBI Genus
Fibrobacter  
NCBI Species
Fibrobacter succinogenes  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Mammals  
Ecosystem Type
Digestive system  
Ecosystem Subtype
Foregut  
Specific Ecosystem
Rumen  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 267071
Genbank 16S ID M62696
Synonym List
GENERAL PROPERTIES
Oxygen Requirement
Anaerobe  
Cell Shape
Rod-shaped  
Motility
Nonmotile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
37  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Singles
Diseases None
Known Habitats Host
Metabolisms Cellulose degrader
Phenotypes
  
Energy Sources
  

 

 

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